RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 BACE1P56817 501 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 ZGPATQ8N5A5 531 aaKnown RBP11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.45□□□□□ -0.585e-7■■□□□ 12.2
RACGAP1-209ENST00000547905 UNC80Q8N2C7 3258 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 SPTBN5Q9NRC6 3674 aaKnown RBP11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 MUC6Q6W4X9 2439 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 RGS3P49796 1198 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 HMGCS2P54868 508 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 RNF180Q86T96 592 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 IVNS1ABPQ9Y6Y0 642 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 GAKO14976 1311 aa11.45□□□□□ -0.58
RACGAP1-209ENST00000547905 CENPFP49454 3210 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 ITGB8P26012 769 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 CAP2P40123 477 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 HERC5Q9UII4 1024 aaKnown RBP11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 IFIT1P09914 478 aaKnown RBP11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 TXNRD2Q9NNW7 524 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 TBX21Q9UL17 535 aa11.44□□□□□ -0.58
RACGAP1-209ENST00000547905 FAM86C2PA6NEL3 165 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 AAMPQ13685 434 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 LMBR1LQ6UX01 489 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 TRPV1Q8NER1 839 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 NKX2-4Q9H2Z4 354 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 MTCH2Q9Y6C9 303 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 PLXNA1Q9UIW2 1896 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 PBX2P40425 430 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 TFF2Q03403 129 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 SH3BP5LQ7L8J4 393 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 ABRAQ8N0Z2 381 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 SHCBP1Q8NEM2 672 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 NUP133Q8WUM0 1156 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 FLRT1Q9NZU1 646 aa11.43□□□□□ -0.58
RACGAP1-209ENST00000547905 TCF20Q9UGU0 1960 aaKnown RBP11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 ASNSP08243 561 aa11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 RARSP54136 660 aaKnown RBP11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 FAAP100Q0VG06 881 aa11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 PORCNQ9H237 461 aa11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 PDS5AQ29RF7 1337 aaKnown RBP11.42□□□□□ -0.58
RACGAP1-209ENST00000547905 LAMA3Q16787 3333 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 PDE8BO95263 885 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 ZFPM1Q8IX07 1006 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 GJD3Q8N144 294 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 GNL3LQ9NVN8 582 aaKnown RBP11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 ELP1O95163 1332 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 Q3C1V9 767 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 LEXMQ3ZCV2 418 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L15C9J2P7 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L10C9JJH3 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L13C9JLJ4 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L11C9JVI0 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L18D6R9N7 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L22D6RA61 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L17D6RBQ6 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L19D6RCP7 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L20D6RJB6 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 DCXO43602 365 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 FGBP02675 491 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 RARBP10826 455 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 NUBP1P53384 320 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 USP17L24Q0WX57 530 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 PUM3Q15397 648 aaKnown RBP11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 PPP2R2DQ66LE6 453 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 FAM178BQ8IXR5 827 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 BDP1A6H8Y1 2624 aa11.4□□□□□ -0.58
RACGAP1-209ENST00000547905 PFKMP08237 780 aa11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 FGFR2P21802 821 aa11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 BMP8AQ7Z5Y6 402 aa11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 VGLL2Q8N8G2 317 aa11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 DDRGK1Q96HY6 314 aa11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 UPF3BQ9BZI7 483 aaKnown RBP11.4□□□□□ -0.59
RACGAP1-209ENST00000547905 A0A1W2PQ45 241 aaPredicted RBP11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 A0A1W2PQY0 241 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 CT47B1P0C2W7 299 aaPredicted RBP11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 ZNF365Q70YC5 407 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 PRKAG3Q9UGI9 489 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 DENND2AQ9ULE3 1009 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 FAM50BQ9Y247 325 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 CACNA1FO60840 1977 aa11.39□□□□□ -0.59
RACGAP1-209ENST00000547905 CNMDO75829 334 aa11.38□□□□□ -0.59
RACGAP1-209ENST00000547905 IGHDP01880 384 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms