RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 Q3C1V9 767 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 GPR142Q7Z601 462 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 C7orf61Q8IZ16 206 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 CLASRPQ8N2M8 674 aaKnown RBP24.71■■□□□ 1.55
SSH1-207ENST00000547862 ACER1Q8TDN7 264 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 CABP5Q9NP86 173 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 ZNF532Q9HCE3 1301 aa24.7■■□□□ 1.54
SSH1-207ENST00000547862 MPHOSPH10O00566 681 aaKnown RBP24.7■■□□□ 1.54
SSH1-207ENST00000547862 IFIT2P09913 472 aaKnown RBP24.7■■□□□ 1.54
SSH1-207ENST00000547862 SHMT1P34896 483 aa24.7■■□□□ 1.54
SSH1-207ENST00000547862 SLC9C2Q5TAH2 1124 aa24.7■■□□□ 1.54
SSH1-207ENST00000547862 GTF3C2Q8WUA4 911 aaPredicted RBP24.7■■□□□ 1.54
SSH1-207ENST00000547862 KIF1BPQ96EK5 621 aa24.7■■□□□ 1.54
SSH1-207ENST00000547862 EDC3Q96F86 508 aaKnown RBP24.7■■□□□ 1.54
SSH1-207ENST00000547862 CRNKL1Q9BZJ0 848 aaKnown RBP24.7■■□□□ 1.54
SSH1-207ENST00000547862 VCAM1P19320 739 aa24.69■■□□□ 1.54
SSH1-207ENST00000547862 CCL14Q16627 93 aa24.69■■□□□ 1.54
SSH1-207ENST00000547862 PLEKHH3Q7Z736 793 aa24.69■■□□□ 1.54
SSH1-207ENST00000547862 SDR42E1Q8WUS8 393 aa24.69■■□□□ 1.54
SSH1-207ENST00000547862 MCM9Q9NXL9 1143 aa24.69■■□□□ 1.54
SSH1-207ENST00000547862 USP17L15C9J2P7 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L13C9JLJ4 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L11C9JVI0 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L18D6R9N7 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L22D6RA61 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L17D6RBQ6 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L19D6RCP7 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L20D6RJB6 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 HMMRO75330 724 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 MS4A1P11836 297 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 RGS2P41220 211 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP14P54578 494 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 USP17L24Q0WX57 530 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 POTEEQ6S8J3 1075 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 LCORLQ8N3X6 602 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 C12orf42Q96LP6 360 aa24.68■■□□□ 1.54
SSH1-207ENST00000547862 ZMYND8Q9ULU4 1186 aaPredicted RBP24.68■■□□□ 1.54
SSH1-207ENST00000547862 SEPT2Q15019 361 aa24.67■■□□□ 1.54
SSH1-207ENST00000547862 ANKLE1Q8NAG6 615 aa24.67■■□□□ 1.54
SSH1-207ENST00000547862 APBA2Q99767 749 aa24.67■■□□□ 1.54
SSH1-207ENST00000547862 KIAA1683Q9H0B3 1180 aa24.67■■□□□ 1.54
SSH1-207ENST00000547862 RPAP3Q9H6T3 665 aaPredicted RBP24.67■■□□□ 1.54
SSH1-207ENST00000547862 DDX19BQ9UMR2 479 aa24.67■■□□□ 1.54
SSH1-207ENST00000547862 RANBP2P49792 3224 aaKnown RBP24.67■■□□□ 1.54
SSH1-207ENST00000547862 CNMDO75829 334 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 CYP2D6P10635 497 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 CAPN2P17655 700 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 SLC44A5Q8NCS7 719 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 NBPF3Q9H094 633 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 C11orf49Q9H6J7 331 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 ARMT1Q9H993 441 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 A0A0G2JMZ2 1700 aa24.66■■□□□ 1.54
SSH1-207ENST00000547862 CCND3P30281 292 aaPredicted RBP24.65■■□□□ 1.54
SSH1-207ENST00000547862 GUCY1A2P33402 732 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 CACNB2Q08289 660 aaPredicted RBP24.65■■□□□ 1.54
SSH1-207ENST00000547862 SLFNL1Q499Z3 407 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 MORN1Q5T089 497 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 MAP3K21Q5TCX8 1036 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 TMED8Q6PL24 325 aaPredicted RBP24.65■■□□□ 1.54
SSH1-207ENST00000547862 PRO3102Q9H379 93 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 STAP2Q9UGK3 403 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 RABGAP1Q9Y3P9 1069 aa24.65■■□□□ 1.54
SSH1-207ENST00000547862 XRCC5P13010 732 aaKnown RBP24.64■■□□□ 1.54
SSH1-207ENST00000547862 SYN1P17600 705 aa24.64■■□□□ 1.54
SSH1-207ENST00000547862 CCNA1P78396 465 aa24.64■■□□□ 1.54
SSH1-207ENST00000547862 CATSPERGQ6ZRH7 1159 aa24.64■■□□□ 1.54
SSH1-207ENST00000547862 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.54
SSH1-207ENST00000547862 RPAP2Q8IXW5 612 aaPredicted RBP24.64■■□□□ 1.54
SSH1-207ENST00000547862 TRMT44Q8IYL2 757 aaKnown RBP24.64■■□□□ 1.54
SSH1-207ENST00000547862 BOLA2Q9H3K6 86 aa24.64■■□□□ 1.54
SSH1-207ENST00000547862 SZT2Q5T011 3432 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 TCRBV5S4A2TA0A5A2 114 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 MNX1P50219 401 aaPredicted RBP24.63■■□□□ 1.53
SSH1-207ENST00000547862 CLEC10AQ8IUN9 316 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 USP6NLQ92738 828 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 TANGO6Q9C0B7 1094 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 PAG1Q9NWQ8 432 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 BTBD7Q9P203 1132 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 OGDHLQ9ULD0 1010 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 PARP14Q460N5 1801 aa24.63■■□□□ 1.53
SSH1-207ENST00000547862 SPDYE16A6NNV3 312 aaPredicted RBP24.62■■□□□ 1.53
SSH1-207ENST00000547862 MBD4O95243 580 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 GABPAQ06546 454 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 MAP2K5Q13163 448 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.62■■□□□ 1.53
SSH1-207ENST00000547862 DYNLL2Q96FJ2 89 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 DCP1AQ9NPI6 582 aaPredicted RBP24.62■■□□□ 1.53
SSH1-207ENST00000547862 ZBTB40Q9NUA8 1239 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 IVNS1ABPQ9Y6Y0 642 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 RLFQ13129 1914 aa24.62■■□□□ 1.53
SSH1-207ENST00000547862 PRKAB2O43741 272 aa24.61■■□□□ 1.53
SSH1-207ENST00000547862 GLRX3O76003 335 aaKnown RBP24.61■■□□□ 1.53
SSH1-207ENST00000547862 SAMD1Q6SPF0 538 aaPredicted RBP24.61■■□□□ 1.53
SSH1-207ENST00000547862 COL11A1P12107 1806 aaPredicted RBP24.61■■□□□ 1.53
SSH1-207ENST00000547862 PFASO15067 1338 aa24.61■■□□□ 1.53
SSH1-207ENST00000547862 RAB11FIP3O75154 756 aa24.6■■□□□ 1.53
SSH1-207ENST00000547862 FLRT1Q9NZU1 646 aa24.6■■□□□ 1.53
SSH1-207ENST00000547862 ZNF236Q9UL36 1845 aa24.6■■□□□ 1.53
SSH1-207ENST00000547862 A0A1W2PRG0 241 aa24.59■■□□□ 1.53
SSH1-207ENST00000547862 CHGBP05060 677 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms