RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 CAP2P40123 477 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 CDK8P49336 464 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 NKG7Q16617 165 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 LDLRAD1Q5T700 205 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 MEI1Q5TIA1 1274 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 PRAMEF13Q5VWM6 474 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 CIAPIN1Q6FI81 312 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 COX4I2Q96KJ9 171 aa6.8□□□□□ -1.32
SCAF11-210ENST00000547654 CNTNAP4Q9C0A0 1308 aa6.79□□□□□ -1.32
SCAF11-210ENST00000547654 GFRA2O00451 464 aa6.79□□□□□ -1.32
SCAF11-210ENST00000547654 LMNB1P20700 586 aa6.79□□□□□ -1.32
SCAF11-210ENST00000547654 EIF4BP23588 611 aaKnown RBP6.79□□□□□ -1.32
SCAF11-210ENST00000547654 KIR3DL1P43629 444 aa6.79□□□□□ -1.32
SCAF11-210ENST00000547654 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-210ENST00000547654 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
SCAF11-210ENST00000547654 RBAK-RBAKDNI3L0D1 243 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 KRT1P04264 644 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
SCAF11-210ENST00000547654 KCNA10Q16322 511 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 CCDC27Q2M243 656 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 AGMOQ6ZNB7 445 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 ATG14Q6ZNE5 492 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 RIN3Q8TB24 985 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 FAM161BQ96MY7 647 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 CD320Q9NPF0 282 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 TTF2Q9UNY4 1162 aaKnown RBP6.78□□□□□ -1.32
SCAF11-210ENST00000547654 SNCAIPQ9Y6H5 919 aa6.78□□□□□ -1.32
SCAF11-210ENST00000547654 NCANO14594 1321 aa6.77□□□□□ -1.32
SCAF11-210ENST00000547654 DNAJC25-GNG10A0A024R161 153 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 CST3P01034 146 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-210ENST00000547654 GRK4P32298 578 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 ST13P50502 369 aaKnown RBP6.77□□□□□ -1.33
SCAF11-210ENST00000547654 HK2P52789 917 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 TTLL10Q6ZVT0 673 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 TMPRSS7Q7RTY8 843 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 MYLIPQ8WY64 445 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 TMEM59LQ9UK28 342 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 PCDHB5Q9Y5E4 795 aa6.77□□□□□ -1.33
SCAF11-210ENST00000547654 B8ZZF3 427 aa6.76□□□□□ -1.33
SCAF11-210ENST00000547654 TNK2Q07912 1038 aa6.76□□□□□ -1.33
SCAF11-210ENST00000547654 TTBK2Q6IQ55 1244 aa6.76□□□□□ -1.33
SCAF11-210ENST00000547654 SLC26A8Q96RN1 970 aa6.76□□□□□ -1.33
SCAF11-210ENST00000547654 KCNK12Q9HB15 430 aa6.76□□□□□ -1.33
SCAF11-210ENST00000547654 RAPGEFL1Q9UHV5 662 aa6.76□□□□□ -1.33
SCAF11-210ENST00000547654 PRRG2O14669 202 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 NUAK1O60285 661 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 ERCC3P19447 782 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 TFE3P19532 575 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-210ENST00000547654 ETV3P41162 512 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 MRPL58Q14197 206 aaKnown RBP6.75□□□□□ -1.33
SCAF11-210ENST00000547654 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
SCAF11-210ENST00000547654 PIWIL2Q8TC59 973 aaKnown RBP6.75□□□□□ -1.33
SCAF11-210ENST00000547654 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-210ENST00000547654 NOC4LQ9BVI4 516 aaKnown RBP6.75□□□□□ -1.33
SCAF11-210ENST00000547654 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-210ENST00000547654 INHBBP09529 407 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 GLDCP23378 1020 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 LIG3P49916 1009 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 ERVFC1P60507 584 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 CDH24Q86UP0 819 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 AMIGO3Q86WK7 504 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 PHC3Q8NDX5 983 aa6.74□□□□□ -1.33
SCAF11-210ENST00000547654 IGSF3O75054 1194 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 HPXP02790 462 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 ESR1P03372 595 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 GARTP22102 1010 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 LINC00310P59036 64 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 SEPT6Q14141 434 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 RHOVQ96L33 236 aa6.73□□□□□ -1.33
SCAF11-210ENST00000547654 TRIT1Q9H3H1 467 aaKnown RBP6.73□□□□□ -1.33
SCAF11-210ENST00000547654 SMG5Q9UPR3 1016 aaKnown RBP6.73□□□□□ -1.33
SCAF11-210ENST00000547654 FAM221AA4D161 298 aa6.72□□□□□ -1.33
SCAF11-210ENST00000547654 PGRP06401 933 aa6.72□□□□□ -1.33
SCAF11-210ENST00000547654 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-210ENST00000547654 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-210ENST00000547654 KCNN1Q92952 543 aa6.72□□□□□ -1.33
SCAF11-210ENST00000547654 TACC3Q9Y6A5 838 aa6.72□□□□□ -1.33
SCAF11-210ENST00000547654 TPP2P29144 1249 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-210ENST00000547654 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-210ENST00000547654 CTSWP56202 376 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 PDE4BQ07343 736 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 MRPL41Q8IXM3 137 aaKnown RBP6.71□□□□□ -1.34
SCAF11-210ENST00000547654 SYTL4Q96C24 671 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-210ENST00000547654 CRELD1Q96HD1 420 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 RNF32Q9H0A6 362 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 ADAMTS10Q9H324 1103 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 KCNQ5Q9NR82 932 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 GPATCH2Q9NW75 528 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 TJP2Q9UDY2 1190 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 TLR6Q9Y2C9 796 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 SHROOM4Q9ULL8 1493 aa6.71□□□□□ -1.34
SCAF11-210ENST00000547654 TRHRP34981 398 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-210ENST00000547654 PSMD2Q13200 908 aa6.7□□□□□ -1.34
SCAF11-210ENST00000547654 ERMP1Q7Z2K6 904 aa6.7□□□□□ -1.34
SCAF11-210ENST00000547654 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms