RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 ZSWIM5Q9P217 1185 aa3.56□□□□□ -1.84
CPNE8-205ENST00000547417 RAPGEFL1Q9UHV5 662 aa3.56□□□□□ -1.84
CPNE8-205ENST00000547417 SNCAIPQ9Y6H5 919 aa3.56□□□□□ -1.84
CPNE8-205ENST00000547417 NPIPB6E9PJ23 425 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 SCAMP3O14828 347 aaKnown RBP3.55□□□□□ -1.84
CPNE8-205ENST00000547417 CST3P01034 146 aaPredicted RBP3.55□□□□□ -1.84
CPNE8-205ENST00000547417 CELA3AP09093 270 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 HMGB1P09429 215 aaKnown RBP3.55□□□□□ -1.84
CPNE8-205ENST00000547417 KIR3DL1P43629 444 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 MAPK8P45983 427 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 ZC3H6P61129 1189 aaKnown RBP3.55□□□□□ -1.84
CPNE8-205ENST00000547417 ALG1LQ6GMV1 187 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 TTLL10Q6ZVT0 673 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 DRC1Q96MC2 740 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 EPB41L4BQ9H329 900 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 SPG7Q9UQ90 795 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 JAG2Q9Y219 1238 aa3.55□□□□□ -1.84
CPNE8-205ENST00000547417 TCAF2A6NFQ2 919 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 PRPF40AO75400 957 aaKnown RBP3.54□□□□□ -1.84
CPNE8-205ENST00000547417 FMR1Q06787 632 aaKnown RBP eCLIP3.54□□□□□ -1.84
CPNE8-205ENST00000547417 TNK2Q07912 1038 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 MRPL58Q14197 206 aaKnown RBP3.54□□□□□ -1.84
CPNE8-205ENST00000547417 KCNA10Q16322 511 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 WIPI1Q5MNZ9 446 aaPredicted RBP3.54□□□□□ -1.84
CPNE8-205ENST00000547417 PRAMEF13Q5VWM6 474 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 CIAPIN1Q6FI81 312 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 ATG14Q6ZNE5 492 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 SV2BQ7L1I2 683 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 TMPRSS7Q7RTY8 843 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 XAGE3Q8WTP9 111 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 SREK1Q8WXA9 508 aaKnown RBP3.54□□□□□ -1.84
CPNE8-205ENST00000547417 KCNN1Q92952 543 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 SLC26A8Q96RN1 970 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 C12orf49Q9H741 205 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 KCNK12Q9HB15 430 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 CD320Q9NPF0 282 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 FAM8A1Q9UBU6 413 aa3.54□□□□□ -1.84
CPNE8-205ENST00000547417 DNAJC25-GNG10A0A024R161 153 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 ETV2O00321 342 aaPredicted RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 RECKO95980 971 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 HPXP02790 462 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 ESR1P03372 595 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 P4HBP07237 508 aaKnown RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 USP17L7P0C7H9 530 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 MED14OSP0DP75 135 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 GLDCP23378 1020 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 CANXP27824 592 aaKnown RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 GRK4P32298 578 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 ATP2B2Q01814 1243 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 XPCQ01831 940 aaPredicted RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 SF3A1Q15459 793 aaKnown RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 TSNAXIP1Q2TAA8 658 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 RALGPS1Q5JS13 557 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 TTBK2Q6IQ55 1244 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 CDH24Q86UP0 819 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 PIWIL2Q8TC59 973 aaKnown RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 MYLIPQ8WY64 445 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 GAL3ST3Q96A11 431 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 SETDB2Q96T68 719 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 BACH2Q9BYV9 841 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 TMEM59LQ9UK28 342 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 WWC3Q9ULE0 1092 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 SMG5Q9UPR3 1016 aaKnown RBP3.53□□□□□ -1.84
CPNE8-205ENST00000547417 TACC3Q9Y6A5 838 aa3.53□□□□□ -1.84
CPNE8-205ENST00000547417 LDHBP07195 334 aaKnown RBP3.52□□□□□ -1.85
CPNE8-205ENST00000547417 LMNB1P20700 586 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 ETV3P41162 512 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 CDK8P49336 464 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 HK2P52789 917 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 ERVFC1P60507 584 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 RPS26P62854 115 aaKnown RBP3.52□□□□□ -1.85
CPNE8-205ENST00000547417 TAGLNQ01995 201 aaKnown RBP3.52□□□□□ -1.85
CPNE8-205ENST00000547417 TMC4Q7Z404 712 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 CREG2Q8IUH2 290 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 FRMD6Q96NE9 622 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 ADAMTS10Q9H324 1103 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 MRS2Q9HD23 443 aa3.52□□□□□ -1.85
CPNE8-205ENST00000547417 METTL5Q9NRN9 209 aaKnown RBP3.52□□□□□ -1.85
CPNE8-205ENST00000547417 TTF2Q9UNY4 1162 aaKnown RBP3.52□□□□□ -1.85
CPNE8-205ENST00000547417 GFRA2O00451 464 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 NUAK1O60285 661 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 SORBS3O60504 671 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 PGRP06401 933 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 INHBBP09529 407 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 SRFP11831 508 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 TPP2P29144 1249 aaPredicted RBP3.51□□□□□ -1.85
CPNE8-205ENST00000547417 LINC00310P59036 64 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 DAB2P98082 770 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 SLC6A19Q695T7 634 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 MRPL41Q8IXM3 137 aaKnown RBP3.51□□□□□ -1.85
CPNE8-205ENST00000547417 UBXN4Q92575 508 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 TRIT1Q9H3H1 467 aaKnown RBP3.51□□□□□ -1.85
CPNE8-205ENST00000547417 TJP2Q9UDY2 1190 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 PARP2Q9UGN5 583 aa3.51□□□□□ -1.85
CPNE8-205ENST00000547417 WASH4PA8MWX3 477 aa3.5□□□□□ -1.85
CPNE8-205ENST00000547417 RBAK-RBAKDNI3L0D1 243 aa3.5□□□□□ -1.85
CPNE8-205ENST00000547417 ERCC5P28715 1186 aaPredicted RBP3.5□□□□□ -1.85
CPNE8-205ENST00000547417 TRHRP34981 398 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms