RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 CRNKL1Q9BZJ0 848 aaKnown RBP22.6■■□□□ 1.21
GCN1-203ENST00000547369 CABP5Q9NP86 173 aa22.6■■□□□ 1.21
GCN1-203ENST00000547369 ZNF532Q9HCE3 1301 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L15C9J2P7 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L13C9JLJ4 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L11C9JVI0 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L18D6R9N7 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L22D6RA61 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L17D6RBQ6 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L19D6RCP7 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L20D6RJB6 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 GOLIM4O00461 696 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 XRCC5P13010 732 aaKnown RBP22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP14P54578 494 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 USP17L24Q0WX57 530 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 PDE3AQ14432 1141 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 KIAA1683Q9H0B3 1180 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 BCL11AQ9H165 835 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 PORCNQ9H237 461 aa22.59■■□□□ 1.21
GCN1-203ENST00000547369 RBM27Q9P2N5 1060 aaKnown RBP22.59■■□□□ 1.21
GCN1-203ENST00000547369 EVI5O60447 810 aa22.58■■□□□ 1.21
GCN1-203ENST00000547369 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
GCN1-203ENST00000547369 ANKLE1Q8NAG6 615 aa22.58■■□□□ 1.21
GCN1-203ENST00000547369 ACER1Q8TDN7 264 aa22.58■■□□□ 1.21
GCN1-203ENST00000547369 TCRBV5S4A2TA0A5A2 114 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 GABPAQ06546 454 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 MAP3K21Q5TCX8 1036 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 CATSPERGQ6ZRH7 1159 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 GPR142Q7Z601 462 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 DIS3LQ8TF46 1054 aaKnown RBP22.57■■□□□ 1.2
GCN1-203ENST00000547369 USP6NLQ92738 828 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 CHMP4BQ9H444 224 aaKnown RBP22.57■■□□□ 1.2
GCN1-203ENST00000547369 MCM9Q9NXL9 1143 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 RABGAP1Q9Y3P9 1069 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 ALPK3Q96L96 1907 aa22.57■■□□□ 1.2
GCN1-203ENST00000547369 PRKAR2AP13861 404 aaKnown RBP22.56■■□□□ 1.2
GCN1-203ENST00000547369 VCAM1P19320 739 aa22.56■■□□□ 1.2
GCN1-203ENST00000547369 GUCY1A2P33402 732 aa22.56■■□□□ 1.2
GCN1-203ENST00000547369 MORN1Q5T089 497 aa22.56■■□□□ 1.2
GCN1-203ENST00000547369 PLEKHH3Q7Z736 793 aa22.56■■□□□ 1.2
GCN1-203ENST00000547369 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
GCN1-203ENST00000547369 SDR42E1Q8WUS8 393 aa22.56■■□□□ 1.2
GCN1-203ENST00000547369 EDC3Q96F86 508 aaKnown RBP22.56■■□□□ 1.2
GCN1-203ENST00000547369 CNMDO75829 334 aa22.55■■□□□ 1.2
GCN1-203ENST00000547369 ZKSCAN1P17029 563 aaPredicted RBP22.55■■□□□ 1.2
GCN1-203ENST00000547369 RGS2P41220 211 aa22.55■■□□□ 1.2
GCN1-203ENST00000547369 EVX2Q03828 476 aa22.55■■□□□ 1.2
GCN1-203ENST00000547369 LCORLQ8N3X6 602 aa22.55■■□□□ 1.2
GCN1-203ENST00000547369 PRO3102Q9H379 93 aa22.55■■□□□ 1.2
GCN1-203ENST00000547369 DCP1AQ9NPI6 582 aaPredicted RBP22.55■■□□□ 1.2
GCN1-203ENST00000547369 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
GCN1-203ENST00000547369 CCNA1P78396 465 aa22.54■■□□□ 1.2
GCN1-203ENST00000547369 SEPT2Q15019 361 aa22.54■■□□□ 1.2
GCN1-203ENST00000547369 BOLA2Q9H3K6 86 aa22.54■■□□□ 1.2
GCN1-203ENST00000547369 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
GCN1-203ENST00000547369 PAG1Q9NWQ8 432 aa22.54■■□□□ 1.2
GCN1-203ENST00000547369 OGDHLQ9ULD0 1010 aa22.54■■□□□ 1.2
GCN1-203ENST00000547369 MPHOSPH10O00566 681 aaKnown RBP22.53■■□□□ 1.2
GCN1-203ENST00000547369 ATP5JP18859 108 aa22.53■■□□□ 1.2
GCN1-203ENST00000547369 LBX2Q6XYB7 198 aa22.53■■□□□ 1.2
GCN1-203ENST00000547369 APBA2Q99767 749 aa22.53■■□□□ 1.2
GCN1-203ENST00000547369 NBPF3Q9H094 633 aa22.53■■□□□ 1.2
GCN1-203ENST00000547369 RPAP3Q9H6T3 665 aaPredicted RBP22.53■■□□□ 1.2
GCN1-203ENST00000547369 ARMT1Q9H993 441 aa22.53■■□□□ 1.2
GCN1-203ENST00000547369 CYP2D6P10635 497 aa22.52■■□□□ 1.2
GCN1-203ENST00000547369 ADD2P35612 726 aa22.52■■□□□ 1.2
GCN1-203ENST00000547369 MNX1P50219 401 aaPredicted RBP22.52■■□□□ 1.2
GCN1-203ENST00000547369 CACNB2Q08289 660 aaPredicted RBP22.52■■□□□ 1.2
GCN1-203ENST00000547369 CCL14Q16627 93 aa22.52■■□□□ 1.2
GCN1-203ENST00000547369 MYH8P13535 1937 aa22.51■■□□□ 1.19
GCN1-203ENST00000547369 GLRX3O76003 335 aaKnown RBP22.51■■□□□ 1.19
GCN1-203ENST00000547369 MAP2K5Q13163 448 aa22.51■■□□□ 1.19
GCN1-203ENST00000547369 SLFNL1Q499Z3 407 aa22.51■■□□□ 1.19
GCN1-203ENST00000547369 HAUS7Q99871 368 aa22.51■■□□□ 1.19
GCN1-203ENST00000547369 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.51■■□□□ 1.196e-9■■■■□ 23.1
GCN1-203ENST00000547369 BTBD7Q9P203 1132 aa22.51■■□□□ 1.19
GCN1-203ENST00000547369 SWAP70Q9UH65 585 aa22.51■■□□□ 1.19
GCN1-203ENST00000547369 BAZ2AQ9UIF9 1905 aaKnown RBP22.51■■□□□ 1.19
GCN1-203ENST00000547369 A0A1W2PRG0 241 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 SPDYE16A6NNV3 312 aaPredicted RBP22.5■■□□□ 1.19
GCN1-203ENST00000547369 PRKAB2O43741 272 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 MBD4O95243 580 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 WDR78Q5VTH9 848 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 SLC44A5Q8NCS7 719 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 C11orf49Q9H6J7 331 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 MYH7P12883 1935 aa22.5■■□□□ 1.19
GCN1-203ENST00000547369 PTPREP23469 700 aa22.49■■□□□ 1.19
GCN1-203ENST00000547369 CCND3P30281 292 aaPredicted RBP22.49■■□□□ 1.19
GCN1-203ENST00000547369 TMEM179Q6ZVK1 233 aa22.49■■□□□ 1.19
GCN1-203ENST00000547369 DYNLL2Q96FJ2 89 aa22.49■■□□□ 1.19
GCN1-203ENST00000547369 ATP8A2Q9NTI2 1148 aa22.49■■□□□ 1.19
GCN1-203ENST00000547369 RANBP2P49792 3224 aaKnown RBP22.49■■□□□ 1.19
GCN1-203ENST00000547369 SLC15A5A6NIM6 579 aa22.48■■□□□ 1.19
GCN1-203ENST00000547369 C7orf61Q8IZ16 206 aa22.48■■□□□ 1.19
GCN1-203ENST00000547369 LRRCC1Q9C099 1032 aa22.48■■□□□ 1.19
GCN1-203ENST00000547369 IVNS1ABPQ9Y6Y0 642 aa22.48■■□□□ 1.19
GCN1-203ENST00000547369 COG2Q14746 738 aa22.47■■□□□ 1.19
GCN1-203ENST00000547369 UBE3CQ15386 1083 aa22.47■■□□□ 1.19
GCN1-203ENST00000547369 C20orf194Q5TEA3 1177 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms