RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SCN4AP35499 1836 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 WDR90Q96KV7 1748 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ZNF541Q9H0D2 1346 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ECM29Q5VYK3 1845 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 GYG1P46976 350 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 CAVIN4Q5BKX8 364 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 AACSQ86V21 672 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 VPS37DQ86XT2 251 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 SMC5Q8IY18 1101 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 CLASRPQ8N2M8 674 aaKnown RBP7.76□□□□□ -1.17
PRKDC-211ENST00000546304 JDP2Q8WYK2 163 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 GCC1Q96CN9 775 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 XAGE2Q96GT9 111 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 COA1Q9GZY4 146 aa7.76□□□□□ -1.17
PRKDC-211ENST00000546304 TLR7Q9NYK1 1049 aaKnown RBP7.76□□□□□ -1.17
PRKDC-211ENST00000546304 DBNLQ9UJU6 430 aaKnown RBP7.76□□□□□ -1.17
PRKDC-211ENST00000546304 YDJCA8MPS7 323 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 SPATA31C2B4DYI2 1134 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-211ENST00000546304 IL2RAP01589 272 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 IGHDP01880 384 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 PHKA1P46020 1223 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 OXLD1Q5BKU9 147 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 ERICH6BQ5W0A0 696 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 EAF2Q96CJ1 260 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-211ENST00000546304 NEUROD6Q96NK8 337 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 DBNDD2Q9BQY9 259 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 ZNRF3Q9ULT6 936 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 KDM2BQ8NHM5 1336 aa7.75□□□□□ -1.17
PRKDC-211ENST00000546304 FZD9O00144 591 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 PIK3CDO00329 1044 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 LZTS3O60299 673 aaPredicted RBP7.74□□□□□ -1.17
PRKDC-211ENST00000546304 IFIT2P09913 472 aaKnown RBP7.74□□□□□ -1.17
PRKDC-211ENST00000546304 IL1R1P14778 569 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 HIBADHP31937 336 aaKnown RBP7.74□□□□□ -1.17
PRKDC-211ENST00000546304 TIMM10P62072 90 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 RASGRF1Q13972 1273 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 GORABQ5T7V8 394 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 CCDC102BQ68D86 513 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 PODNQ7Z5L7 613 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 FBXO33Q7Z6M2 555 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 CCDC136Q96JN2 1154 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 FAM84BQ96KN1 310 aaPredicted RBP7.74□□□□□ -1.17
PRKDC-211ENST00000546304 BCL11AQ9H165 835 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 CD209Q9NNX6 404 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 RAB6BQ9NRW1 208 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 PDS5AQ29RF7 1337 aaKnown RBP7.74□□□□□ -1.17
PRKDC-211ENST00000546304 MYH2Q9UKX2 1941 aa7.74□□□□□ -1.17
PRKDC-211ENST00000546304 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 PSMD14O00487 310 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 RAD17O75943 681 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 ARID4AP29374 1257 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 EIF6P56537 245 aaKnown RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 NUCB1Q02818 461 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 CENPCQ03188 943 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 CXCL9Q07325 125 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 TTC39AQ5SRH9 613 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 CENPQQ7L2Z9 268 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 TDRD7Q8NHU6 1098 aaKnown RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 ADAMTS19Q8TE59 1207 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 GPATCH3Q96I76 525 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 LNPKQ9C0E8 428 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 CCDC8Q9H0W5 538 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 GNL3LQ9NVN8 582 aaKnown RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 IQSEC3Q9UPP2 1182 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-211ENST00000546304 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 FAM205AQ6ZU69 1335 aa7.73□□□□□ -1.17
PRKDC-211ENST00000546304 USP17L3A6NCW0 530 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 USP17L4A6NCW7 530 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 A6NJR5 290 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 FRAT2O75474 233 aaPredicted RBP7.72□□□□□ -1.17
PRKDC-211ENST00000546304 UQCRFS1P1P0C7P4 283 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 RHOQP17081 205 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 GTF2IP78347 998 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 POU4F2Q12837 409 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 CHAF1AQ13111 956 aaPredicted RBP7.72□□□□□ -1.17
PRKDC-211ENST00000546304 CCDC158Q5M9N0 1113 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 DACT2Q5SW24 774 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 ANKRD45Q5TZF3 282 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 STRIP1Q5VSL9 837 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 B4GALNT3Q6L9W6 998 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 USP17L1Q7RTZ2 530 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 CHD1LQ86WJ1 897 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 GPC2Q8N158 579 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 OTUD7AQ8TE49 926 aaPredicted RBP7.72□□□□□ -1.17
PRKDC-211ENST00000546304 ETNK1Q9HBU6 452 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 JAG2Q9Y219 1238 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 DYRK1BQ9Y463 629 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 GJA3Q9Y6H8 435 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 MYO3BQ8WXR4 1341 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 SALL3Q9BXA9 1300 aa7.72□□□□□ -1.17
PRKDC-211ENST00000546304 CDK5RAP2Q96SN8 1893 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 GLTPD2A6NH11 291 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 SKIP12755 728 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 MX1P20591 662 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms