RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ACER1Q8TDN7 264 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 ESYT1Q9BSJ8 1104 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 KANSL2Q9H9L4 492 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 INCENPQ9NQS7 918 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 TSPY3P0CV98 308 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 TSPY8P0CW00 308 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 HSPA8P11142 646 aaKnown RBP19.95■□□□□ 0.78
LTBR-215ENST00000546296 LBX1P52954 281 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 TFAP4Q01664 338 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 PTH1RQ03431 593 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 ICA1Q05084 483 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 TAF1CQ15572 869 aaPredicted RBP19.95■□□□□ 0.78
LTBR-215ENST00000546296 ZYXQ15942 572 aaKnown RBP19.95■□□□□ 0.78
LTBR-215ENST00000546296 RRP12Q5JTH9 1297 aaKnown RBP19.95■□□□□ 0.78
LTBR-215ENST00000546296 USP17L2Q6R6M4 530 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 ZFYVE28Q9HCC9 887 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 ARHGEF10LQ9HCE6 1279 aa19.95■□□□□ 0.78
LTBR-215ENST00000546296 ZCCHC17Q9NP64 241 aaKnown RBP19.95■□□□□ 0.78
LTBR-215ENST00000546296 RANBP6O60518 1105 aaKnown RBP19.94■□□□□ 0.78
LTBR-215ENST00000546296 USP14P54578 494 aa19.94■□□□□ 0.78
LTBR-215ENST00000546296 SH3D19Q5HYK7 790 aa19.94■□□□□ 0.78
LTBR-215ENST00000546296 FAM47AQ5JRC9 791 aa19.94■□□□□ 0.78
LTBR-215ENST00000546296 GPAT2Q6NUI2 795 aa19.94■□□□□ 0.78
LTBR-215ENST00000546296 MFSD6Q6ZSS7 791 aa19.94■□□□□ 0.78
LTBR-215ENST00000546296 PROCA1Q8NCQ7 364 aaPredicted RBP19.94■□□□□ 0.78
LTBR-215ENST00000546296 RNF41Q9H4P4 317 aaPredicted RBP19.94■□□□□ 0.78
LTBR-215ENST00000546296 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.94■□□□□ 0.78
LTBR-215ENST00000546296 U3KPZ7 1027 aaPredicted RBP19.94■□□□□ 0.78
LTBR-215ENST00000546296 TSPY2A6NKD2 308 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 PABPC4Q13310 644 aaKnown RBP eCLIP19.93■□□□□ 0.78
LTBR-215ENST00000546296 CRHR2Q13324 411 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 DGKZQ13574 1117 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 AKNAD1Q5T1N1 836 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 CLEC10AQ8IUN9 316 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 KIAA1683Q9H0B3 1180 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 SH2D4AQ9H788 454 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 AGTPBP1Q9UPW5 1226 aa19.93■□□□□ 0.78
LTBR-215ENST00000546296 ATAD5Q96QE3 1844 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 ORC4O43929 436 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 PCP11498 1178 aaKnown RBP19.92■□□□□ 0.78
LTBR-215ENST00000546296 EEF2P13639 858 aaKnown RBP19.92■□□□□ 0.78
LTBR-215ENST00000546296 TREML2Q5T2D2 321 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 NEDD1Q8NHV4 660 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 STAG1Q8WVM7 1258 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.92■□□□□ 0.78
LTBR-215ENST00000546296 R3HDMLQ9H3Y0 253 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 ANO2Q9NQ90 1003 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 EMILIN3Q9NT22 766 aa19.92■□□□□ 0.78
LTBR-215ENST00000546296 A0A1W2PRG0 241 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 FGRP09769 529 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 OSBPP22059 807 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 SIAH1Q8IUQ4 282 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 TBC1D10CQ8IV04 446 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 PARK7Q99497 189 aaKnown RBP19.91■□□□□ 0.78
LTBR-215ENST00000546296 CFHR5Q9BXR6 569 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 PNMA3Q9UL41 463 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 SLC45A1Q9Y2W3 748 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 TACC3Q9Y6A5 838 aa19.91■□□□□ 0.78
LTBR-215ENST00000546296 LAMB1P07942 1786 aa19.9■□□□□ 0.78
LTBR-215ENST00000546296 RAD21O60216 631 aa19.9■□□□□ 0.78
LTBR-215ENST00000546296 MAP4K1Q92918 833 aa19.9■□□□□ 0.78
LTBR-215ENST00000546296 NBPF3Q9H094 633 aa19.9■□□□□ 0.78
LTBR-215ENST00000546296 CLIP2Q9UDT6 1046 aa19.9■□□□□ 0.78
LTBR-215ENST00000546296 TMX2Q9Y320 296 aa19.9■□□□□ 0.78
LTBR-215ENST00000546296 GPR25O00155 361 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 CYP2C8P10632 490 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 PPP4R3BQ5MIZ7 849 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 PHIPQ8WWQ0 1821 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 ESR2Q92731 530 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 CEP95Q96GE4 821 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
LTBR-215ENST00000546296 MTMR4Q9NYA4 1195 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 NYAP2Q9P242 653 aa19.89■□□□□ 0.77
LTBR-215ENST00000546296 RBM8AQ9Y5S9 174 aaKnown RBP19.89■□□□□ 0.77
LTBR-215ENST00000546296 IGKV6D-41A0A0C4DH26 115 aa19.88■□□□□ 0.77
LTBR-215ENST00000546296 TTLL1O95922 423 aa19.88■□□□□ 0.77
LTBR-215ENST00000546296 IRX3P78415 501 aaPredicted RBP19.88■□□□□ 0.77
LTBR-215ENST00000546296 SMCR8Q8TEV9 937 aaPredicted RBP19.88■□□□□ 0.77
LTBR-215ENST00000546296 C12orf42Q96LP6 360 aa19.88■□□□□ 0.77
LTBR-215ENST00000546296 GOPCQ9HD26 462 aa19.88■□□□□ 0.77
LTBR-215ENST00000546296 PRDM10Q9NQV6 1147 aa19.88■□□□□ 0.77
LTBR-215ENST00000546296 USP17L15C9J2P7 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L13C9JLJ4 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L11C9JVI0 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L18D6R9N7 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L22D6RA61 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L17D6RBQ6 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L19D6RCP7 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L20D6RJB6 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 TLR2O60603 784 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 FKTNO75072 461 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 USP17L24Q0WX57 530 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 SPICE1Q8N0Z3 855 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 KRT23Q9C075 422 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 ASCC2Q9H1I8 757 aaPredicted RBP19.87■□□□□ 0.77
LTBR-215ENST00000546296 VCPKMTQ9H867 229 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 CNNM2Q9H8M5 875 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 STX8Q9UNK0 236 aa19.87■□□□□ 0.77
LTBR-215ENST00000546296 MYH8P13535 1937 aa19.86■□□□□ 0.77
LTBR-215ENST00000546296 NEDD4P46934 1319 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms