RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 MICALL2Q8IY33 904 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 TRIM22Q8IYM9 498 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 PNMA1Q8ND90 353 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 CCDC17Q96LX7 622 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 CNOT7Q9UIV1 285 aaKnown RBP22.63■■□□□ 1.21
SKP2-208ENST00000546211 SHTN1A0MZ66 631 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 AKR1B1P15121 316 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 MCTP1Q6DN14 999 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 PHKBQ93100 1093 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 CSRNP1Q96S65 589 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 SLC26A6Q9BXS9 759 aa22.63■■□□□ 1.21
SKP2-208ENST00000546211 FMNL1O95466 1100 aaPredicted RBP22.62■■□□□ 1.21
SKP2-208ENST00000546211 NBPF9Q3BBW0 867 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 FAM83AQ86UY5 434 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 WASF1Q92558 559 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 CEP95Q96GE4 821 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 C8orf76Q96K31 380 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 MAP3K14Q99558 947 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 TMEM47Q9BQJ4 181 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 DNAJC18Q9H819 358 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 MYH8P13535 1937 aa22.62■■□□□ 1.21
SKP2-208ENST00000546211 SIPA1L1O43166 1804 aa22.61■■□□□ 1.21
SKP2-208ENST00000546211 KIF5BP33176 963 aa22.61■■□□□ 1.21
SKP2-208ENST00000546211 FOSBP53539 338 aa22.61■■□□□ 1.21
SKP2-208ENST00000546211 PPP4R3BQ5MIZ7 849 aa22.61■■□□□ 1.21
SKP2-208ENST00000546211 RBM26Q5T8P6 1007 aaKnown RBP22.61■■□□□ 1.21
SKP2-208ENST00000546211 METTL16Q86W50 562 aaKnown RBP22.61■■□□□ 1.21
SKP2-208ENST00000546211 DICER1Q9UPY3 1922 aaKnown RBP22.61■■□□□ 1.21
SKP2-208ENST00000546211 CNTNAP1P78357 1384 aa22.6■■□□□ 1.21
SKP2-208ENST00000546211 MPHOSPH10O00566 681 aaKnown RBP22.6■■□□□ 1.21
SKP2-208ENST00000546211 TOP1P11387 765 aaKnown RBP22.6■■□□□ 1.21
SKP2-208ENST00000546211 YBX3P16989 372 aaKnown RBP eCLIP22.6■■□□□ 1.212e-8■■□□□ 12.2
SKP2-208ENST00000546211 NOVP48745 357 aa22.6■■□□□ 1.21
SKP2-208ENST00000546211 TNNI2P48788 182 aa22.6■■□□□ 1.21
SKP2-208ENST00000546211 GPC2Q8N158 579 aa22.6■■□□□ 1.21
SKP2-208ENST00000546211 RGS22Q8NE09 1264 aa22.6■■□□□ 1.21
SKP2-208ENST00000546211 ALG1Q9BT22 464 aa22.6■■□□□ 1.21
SKP2-208ENST00000546211 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.6■■□□□ 1.21
SKP2-208ENST00000546211 HERC5Q9UII4 1024 aaKnown RBP22.6■■□□□ 1.21
SKP2-208ENST00000546211 IGKV6D-41A0A0C4DH26 115 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 H7C1D1 291 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 FOXD4L6Q3SYB3 417 aaPredicted RBP22.59■■□□□ 1.21
SKP2-208ENST00000546211 CERKLQ49MI3 558 aaPredicted RBP22.59■■□□□ 1.21
SKP2-208ENST00000546211 TATDN1Q6P1N9 297 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 FOXD4L3Q6VB84 417 aaPredicted RBP22.59■■□□□ 1.21
SKP2-208ENST00000546211 FERMT3Q86UX7 667 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 ZSCAN16Q9H4T2 348 aaPredicted RBP22.59■■□□□ 1.21
SKP2-208ENST00000546211 MTMR4Q9NYA4 1195 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 FAM196BA6NMK8 535 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 AKAP17AQ02040 695 aaKnown RBP22.59■■□□□ 1.21
SKP2-208ENST00000546211 TNFAIP1Q13829 316 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 TMTC3Q6ZXV5 915 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 NBPF11Q86T75 865 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 RNF26Q9BY78 433 aaPredicted RBP22.59■■□□□ 1.21
SKP2-208ENST00000546211 RNF181Q9P0P0 153 aa22.59■■□□□ 1.21
SKP2-208ENST00000546211 DEXIO95424 95 aa22.58■■□□□ 1.2
SKP2-208ENST00000546211 KIF4BQ2VIQ3 1234 aa22.58■■□□□ 1.2
SKP2-208ENST00000546211 TBC1D10BQ4KMP7 808 aaPredicted RBP22.58■■□□□ 1.2
SKP2-208ENST00000546211 SAMD7Q7Z3H4 446 aa22.58■■□□□ 1.2
SKP2-208ENST00000546211 PLEKHA8P1O95397 391 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 TTLL1O95922 423 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 SLURP2P0DP57 97 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 GNAQP50148 359 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 GUCY1B3Q02153 619 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 TRIM29Q14134 588 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 GRM4Q14833 912 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 CMTR1Q8N1G2 835 aaKnown RBP22.57■■□□□ 1.2
SKP2-208ENST00000546211 FBXO18Q8NFZ0 1043 aa22.57■■□□□ 1.2
SKP2-208ENST00000546211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.57■■□□□ 1.2
SKP2-208ENST00000546211 SBF1O95248 1867 aa22.56■■□□□ 1.2
SKP2-208ENST00000546211 EGFRP00533 1210 aa22.56■■□□□ 1.2
SKP2-208ENST00000546211 RESTQ13127 1097 aa22.56■■□□□ 1.2
SKP2-208ENST00000546211 CHAMP1Q96JM3 812 aa22.56■■□□□ 1.2
SKP2-208ENST00000546211 TMEM39BQ9GZU3 492 aa22.56■■□□□ 1.2
SKP2-208ENST00000546211 PRPF3O43395 683 aaKnown RBP22.55■■□□□ 1.2
SKP2-208ENST00000546211 GPRC5DQ9NZD1 345 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 CLIP2Q9UDT6 1046 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 FUT2Q10981 343 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 ABCB5Q2M3G0 1257 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 TMEM179Q6ZVK1 233 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 AIFM3Q96NN9 605 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 MTMR7Q9Y216 660 aa22.55■■□□□ 1.2
SKP2-208ENST00000546211 NCLP19338 710 aaKnown RBP22.54■■□□□ 1.2
SKP2-208ENST00000546211 OTUD7BQ6GQQ9 843 aa22.54■■□□□ 1.2
SKP2-208ENST00000546211 SRBD1Q8N5C6 995 aaKnown RBP22.54■■□□□ 1.2
SKP2-208ENST00000546211 KANSL2Q9H9L4 492 aa22.54■■□□□ 1.2
SKP2-208ENST00000546211 CABP5Q9NP86 173 aa22.54■■□□□ 1.2
SKP2-208ENST00000546211 MAD2L2Q9UI95 211 aa22.54■■□□□ 1.2
SKP2-208ENST00000546211 CNTNAP5Q8WYK1 1306 aa22.54■■□□□ 1.2
SKP2-208ENST00000546211 GREB1LQ9C091 1923 aaPredicted RBP22.54■■□□□ 1.2
SKP2-208ENST00000546211 TBC1D12O60347 775 aa22.53■■□□□ 1.2
SKP2-208ENST00000546211 DNM1Q05193 864 aaKnown RBP22.53■■□□□ 1.2
SKP2-208ENST00000546211 RASA3Q14644 834 aa22.53■■□□□ 1.2
SKP2-208ENST00000546211 C9orf131Q5VYM1 1079 aa22.53■■□□□ 1.2
SKP2-208ENST00000546211 KRT40Q6A162 431 aa22.53■■□□□ 1.2
SKP2-208ENST00000546211 LZTS2Q9BRK4 669 aa22.53■■□□□ 1.2
SKP2-208ENST00000546211 RBM27Q9P2N5 1060 aaKnown RBP22.53■■□□□ 1.2
SKP2-208ENST00000546211 HACL1Q9UJ83 578 aa22.53■■□□□ 1.2
SKP2-208ENST00000546211 PRPF40AO75400 957 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms