RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 H3BQV1 296 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 CPLX1O14810 134 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 IFIT3O14879 490 aaKnown RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 ZBTB43O43298 467 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 KDM4AO75164 1064 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 CTDNEP1O95476 244 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 DEKP35659 375 aaKnown RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 FKBP1AP62942 108 aaKnown RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 CCT2P78371 535 aaKnown RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 KRT85P78386 507 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 WTAPQ15007 396 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 MFSD14BQ5SR56 506 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 CTR9Q6PD62 1173 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 NFXL1Q6ZNB6 911 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 CHST3Q7LGC8 479 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 CCDC125Q86Z20 511 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 AMOTL1Q8IY63 956 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 TMTC2Q8N394 836 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 IGDCC4Q8TDY8 1250 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 FOXD4L4Q8WXT5 416 aaPredicted RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 ZNF622Q969S3 477 aaKnown RBP eCLIP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 UBAC1Q9BSL1 405 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 RTFDC1Q9BY42 306 aaPredicted RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 ZSCAN16Q9H4T2 348 aaPredicted RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 IL21Q9HBE4 155 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 BRPF3Q9ULD4 1205 aa6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 NAP1L2Q9ULW6 460 aaPredicted RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 DDX49Q9Y6V7 483 aaKnown RBP6.38□□□□□ -1.39
NPIPB3-214ENST00000545358 ELP1O95163 1332 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 TNKSO95271 1327 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 GPR75-ASB3A0A0A6YYF3 556 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 MINDY4BA8MYZ0 360 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 IRF6O14896 467 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 NCLP19338 710 aaKnown RBP6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 BTDP43251 543 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 USP5P45974 858 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 APLP1P51693 650 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 PDE4BQ07343 736 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 RESTQ13127 1097 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 PPP2R5BQ15173 497 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 ATL3Q6DD88 541 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 SYNE3Q6ZMZ3 975 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 IQCA1Q86XH1 822 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 SUPT20HQ8NEM7 779 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 SYAP1Q96A49 352 aaPredicted RBP6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 ZC3H12CQ9C0D7 883 aaKnown RBP6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 NCOA5Q9HCD5 579 aaKnown RBP6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 TOMM22Q9NS69 142 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 MKRN1Q9UHC7 482 aaKnown RBP6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 JAG2Q9Y219 1238 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 SLC12A7Q9Y666 1083 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 TACC3Q9Y6A5 838 aa6.37□□□□□ -1.39
NPIPB3-214ENST00000545358 CCDC196A0A1B0GTZ2 297 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 USP17L12C9JPN9 530 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 USP17L21D6R901 530 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 ACTN4O43707 911 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 PRPF40AO75400 957 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 DDAH1O94760 285 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 CALM1P0DP23 149 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 CALM2P0DP24 149 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 CALM3P0DP25 149 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 UBE2HP62256 183 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 GTF2IP78347 998 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 SEC23AQ15436 765 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 DIXDC1Q155Q3 683 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 GRIK5Q16478 980 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 TJAP1Q5JTD0 557 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 RRP12Q5JTH9 1297 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 L1TD1Q5T7N2 865 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 C12orf60Q5U649 245 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 PODNQ7Z5L7 613 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 MICU3Q86XE3 530 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 ZNF654Q8IZM8 581 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 SH3RF3Q8TEJ3 882 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 WASF1Q92558 559 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 DDX11Q96FC9 970 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 MTRQ99707 1265 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 SCAND2PQ9GZW5 306 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 ZNF287Q9HBT7 754 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 MCM9Q9NXL9 1143 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 ORC3Q9UBD5 711 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 CNPY2Q9Y2B0 182 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 DAGLAQ9Y4D2 1042 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 MYH1P12882 1939 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 TCHHQ07283 1943 aa6.36□□□□□ -1.39
NPIPB3-214ENST00000545358 PLIN4Q96Q06 1357 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 FLT1P17948 1338 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 MYO3BQ8WXR4 1341 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 CYP2D7A0A087X1C5 515 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 FSD2A1L4K1 749 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 FIBPO43427 364 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 CFHP08603 1231 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 FDPSP14324 419 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 IFNAR1P17181 557 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 RHBDL3P58872 404 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 ZNF445P59923 1031 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms