RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.07□□□□□ -1.44
SNHG1-222ENST00000545308 SULF2Q8IWU5 870 aa6.07□□□□□ -1.44
SNHG1-222ENST00000545308 NLGN1Q8N2Q7 840 aa6.07□□□□□ -1.44
SNHG1-222ENST00000545308 TOP6BLQ8N6T0 577 aa6.07□□□□□ -1.44
SNHG1-222ENST00000545308 GOLM1Q8NBJ4 401 aa6.07□□□□□ -1.44
SNHG1-222ENST00000545308 RNF214Q8ND24 703 aa6.07□□□□□ -1.44
SNHG1-222ENST00000545308 TNKS2Q9H2K2 1166 aa6.07□□□□□ -1.44
SNHG1-222ENST00000545308 SSU72Q9NP77 194 aaKnown RBP6.07□□□□□ -1.44
SNHG1-222ENST00000545308 RASIP1Q5U651 963 aa6.06□□□□□ -1.44
SNHG1-222ENST00000545308 ANGEL2Q5VTE6 544 aaKnown RBP6.06□□□□□ -1.44
SNHG1-222ENST00000545308 SDE2Q6IQ49 451 aa6.06□□□□□ -1.44
SNHG1-222ENST00000545308 JAZF1Q86VZ6 243 aa6.06□□□□□ -1.44
SNHG1-222ENST00000545308 CKAP2LQ8IYA6 745 aa6.06□□□□□ -1.44
SNHG1-222ENST00000545308 HEXIM2Q96MH2 286 aaKnown RBP6.06□□□□□ -1.44
SNHG1-222ENST00000545308 CDK11AQ9UQ88 783 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-222ENST00000545308 SNX11Q9Y5W9 270 aa6.06□□□□□ -1.44
SNHG1-222ENST00000545308 KLF4O43474 513 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 NME2P22392 152 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 COL9A2Q14055 689 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-222ENST00000545308 SNAP47Q5SQN1 464 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 NBPF6Q5VWK0 638 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 PCNX4Q63HM2 1172 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 MAP1SQ66K74 1059 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-222ENST00000545308 SLC23A3Q6PIS1 610 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 FAM196AQ6ZSG2 479 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 ANKS3Q6ZW76 656 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 FAM214BQ7L5A3 538 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 SLITRK4Q8IW52 837 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 FBXO27Q8NI29 283 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 NBPF4Q96M43 638 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 EMILIN2Q9BXX0 1053 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 PCDHB5Q9Y5E4 795 aa6.05□□□□□ -1.44
SNHG1-222ENST00000545308 ANKRD62A6NC57 917 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 ITIH2P19823 946 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 BMP6P22004 513 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
SNHG1-222ENST00000545308 ZNF252P-AS1Q0IIN9 211 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 APOBRQ0VD83 1088 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 PKN1Q16512 942 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 BNC2Q6ZN30 1099 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-222ENST00000545308 KSR1Q8IVT5 923 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 FLAD1Q8NFF5 587 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 GPBAR1Q8TDU6 330 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 NKD1Q969G9 470 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 CACNA2D2Q9NY47 1150 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 STRIP2Q9ULQ0 834 aa6.04□□□□□ -1.44
SNHG1-222ENST00000545308 UNC13AQ9UPW8 1703 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 IGF2BP3O00425 579 aaKnown RBP eCLIP6.03□□□□□ -1.44
SNHG1-222ENST00000545308 TLR3O15455 904 aaKnown RBP6.03□□□□□ -1.44
SNHG1-222ENST00000545308 F13A1P00488 732 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 EGFLAMQ63HQ2 1017 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
SNHG1-222ENST00000545308 ASB11Q8WXH4 323 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 ANAPC16Q96DE5 110 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 SHDQ96IW2 340 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 SBNO2Q9Y2G9 1366 aa6.03□□□□□ -1.44
SNHG1-222ENST00000545308 FAM221AA4D161 298 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 PPM1GO15355 546 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-222ENST00000545308 RAB33AQ14088 237 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 TCEAL1Q15170 157 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 NFE2L2Q16236 605 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 SEZ6Q53EL9 994 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 PPM1JQ5JR12 505 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 MPRIPQ6WCQ1 1025 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 CCDC81Q6ZN84 652 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 SPACA3Q8IXA5 215 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 MKL1Q969V6 931 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 ACSBG1Q96GR2 724 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 SRRTQ9BXP5 876 aaKnown RBP6.02□□□□□ -1.45
SNHG1-222ENST00000545308 LRRC3Q9BY71 257 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 CBX8Q9HC52 389 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 PRDM10Q9NQV6 1147 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 PRDM7Q9NQW5 492 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 PPT2Q9UMR5 302 aa6.02□□□□□ -1.45
SNHG1-222ENST00000545308 MRPL42Q9Y6G3 142 aaKnown RBP6.02□□□□□ -1.45
SNHG1-222ENST00000545308 NTF4P34130 210 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 MESP2Q0VG99 397 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 IKZF1Q13422 519 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 SEPT6Q14141 434 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 FBLN7Q53RD9 439 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 CCDC84Q86UT8 332 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-222ENST00000545308 ZSWIM9Q86XI8 627 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 FAM169BQ8N8A8 192 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 CPLX3Q8WVH0 158 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 GATAD2BQ8WXI9 593 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 JARID2Q92833 1246 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-222ENST00000545308 MRFAP1L1Q96HT8 127 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 SLC38A3Q99624 504 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 SIRPGQ9P1W8 387 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 PRKAG3Q9UGI9 489 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.01□□□□□ -1.45
SNHG1-222ENST00000545308 CSADQ9Y600 493 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
SNHG1-222ENST00000545308 SMAD7O15105 426 aaKnown RBP6□□□□□ -1.45
SNHG1-222ENST00000545308 CDK11BP21127 795 aaKnown RBP6□□□□□ -1.45
SNHG1-222ENST00000545308 ZP2Q05996 745 aa6□□□□□ -1.45
SNHG1-222ENST00000545308 RING1Q06587 406 aa6□□□□□ -1.45
SNHG1-222ENST00000545308 NKPD1Q17RQ9 610 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms