RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CCDC102BQ68D86 513 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 ATG9AQ7Z3C6 839 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 DPP9Q86TI2 863 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 ABRAQ8N0Z2 381 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 TRPV1Q8NER1 839 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 HERVK_113Q902F9 699 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 TMEM39AQ9NV64 488 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 ABCF2Q9UG63 623 aa9.04□□□□□ -0.96
COPA-207ENST00000545284 DNAH12Q6ZR08 3092 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 PIEZO1Q92508 2521 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 NCOR1O75376 2440 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 FAM196BA6NMK8 535 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 DCDC2CA8MYV0 355 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 CNMDO75829 334 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 TIMP1P01033 207 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 PLCG2P16885 1265 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 IL15P40933 162 aaPredicted RBP9.03□□□□□ -0.96
COPA-207ENST00000545284 PHKA1P46020 1223 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 EPHB4P54760 987 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 MECOMQ03112 1051 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 EXOSC9Q06265 439 aaKnown RBP9.03□□□□□ -0.96
COPA-207ENST00000545284 RRP1BQ14684 758 aaKnown RBP9.03□□□□□ -0.96
COPA-207ENST00000545284 ATF7IPQ6VMQ6 1270 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 CATSPERGQ6ZRH7 1159 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 RNF180Q86T96 592 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 PPM1EQ8WY54 764 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 TSEN34Q9BSV6 310 aaKnown RBP9.03□□□□□ -0.96
COPA-207ENST00000545284 PBX4Q9BYU1 374 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 PRKRIP1Q9H875 184 aaPredicted RBP9.03□□□□□ -0.96
COPA-207ENST00000545284 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 LTBP2Q14767 1821 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 MROH7Q68CQ1 1323 aa9.03□□□□□ -0.96
COPA-207ENST00000545284 ERC2O15083 957 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 PEX10O60683 326 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 POU3F3P20264 500 aaPredicted RBP9.02□□□□□ -0.97
COPA-207ENST00000545284 PPIGQ13427 754 aaKnown RBP eCLIP9.02□□□□□ -0.971e-8■■□□□ 13.4
COPA-207ENST00000545284 RASGRF1Q13972 1273 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 WDR78Q5VTH9 848 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 MFSD5Q6N075 450 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 PSRC1Q6PGN9 363 aaPredicted RBP9.02□□□□□ -0.97
COPA-207ENST00000545284 CCDC129Q6ZRS4 1044 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 SHCBP1Q8NEM2 672 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 NPLOC4Q8TAT6 608 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 NUP133Q8WUM0 1156 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 SNX27Q96L92 541 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 USP44Q9H0E7 712 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 MTIF3Q9H2K0 278 aaKnown RBP9.02□□□□□ -0.97
COPA-207ENST00000545284 PRDM12Q9H4Q4 367 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 HOXC10Q9NYD6 342 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 DOCK2Q92608 1830 aa9.02□□□□□ -0.97
COPA-207ENST00000545284 BDP1A6H8Y1 2624 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 BAG3O95817 575 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 RARBP10826 455 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 IGFBP4P22692 258 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 ADORA2AP29274 412 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 FAAP100Q0VG06 881 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 ADGRE1Q14246 886 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
COPA-207ENST00000545284 TMEM240Q5SV17 173 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
COPA-207ENST00000545284 TMEM199Q8N511 208 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 MB21D1Q8N884 522 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 NSUN4Q96CB9 384 aaKnown RBP9.01□□□□□ -0.97
COPA-207ENST00000545284 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.01□□□□□ -0.977e-13■■□□□ 13.9
COPA-207ENST00000545284 NOL10Q9BSC4 688 aaKnown RBP9.01□□□□□ -0.97
COPA-207ENST00000545284 TRIM34Q9BYJ4 488 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 KCNH6Q9H252 994 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 SLC28A3Q9HAS3 691 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 ZBTB21Q9ULJ3 1066 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 COG5Q9UP83 839 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 AKAP2Q9Y2D5 859 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 PTPRCP08575 1304 aa9.01□□□□□ -0.97
COPA-207ENST00000545284 ROBO3Q96MS0 1386 aa9□□□□□ -0.97
COPA-207ENST00000545284 MOXD2PA6NHM9 499 aa9□□□□□ -0.97
COPA-207ENST00000545284 PPP4CP60510 307 aa9□□□□□ -0.97
COPA-207ENST00000545284 CCDC85BQ15834 202 aaPredicted RBP9□□□□□ -0.97
COPA-207ENST00000545284 ALYREFQ86V81 257 aaKnown RBP9□□□□□ -0.97
COPA-207ENST00000545284 TEX11Q8IYF3 940 aa9□□□□□ -0.97
COPA-207ENST00000545284 FERMT2Q96AC1 680 aa9□□□□□ -0.97
COPA-207ENST00000545284 MROH8Q9H579 483 aa9□□□□□ -0.97
COPA-207ENST00000545284 XPNPEP3Q9NQH7 507 aa9□□□□□ -0.97
COPA-207ENST00000545284 TBX21Q9UL17 535 aa9□□□□□ -0.97
COPA-207ENST00000545284 ZNF521Q96K83 1311 aa9□□□□□ -0.97
COPA-207ENST00000545284 A0A1W2PQ45 241 aaPredicted RBP8.99□□□□□ -0.97
COPA-207ENST00000545284 A0A1W2PQY0 241 aa8.99□□□□□ -0.97
COPA-207ENST00000545284 SPDYE16A6NNV3 312 aaPredicted RBP8.99□□□□□ -0.97
COPA-207ENST00000545284 PQBP1O60828 265 aaKnown RBP8.99□□□□□ -0.97
COPA-207ENST00000545284 HLA-DOAP06340 250 aa8.99□□□□□ -0.97
COPA-207ENST00000545284 JAG1P78504 1218 aa8.99□□□□□ -0.97
COPA-207ENST00000545284 DDX10Q13206 875 aaKnown RBP8.99□□□□□ -0.97
COPA-207ENST00000545284 COG2Q14746 738 aa8.99□□□□□ -0.97
COPA-207ENST00000545284 FAM47AQ5JRC9 791 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms