RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MLLT3P42568 568 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-209ENST00000544610 BTDP43251 543 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 FLT3LGP49771 235 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 RHBDL3P58872 404 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 PICALMQ13492 652 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 CAMK2BQ13554 666 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 TTC22Q5TAA0 569 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 GADL1Q6ZQY3 521 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 ZSCAN29Q8IWY8 852 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-209ENST00000544610 SMCR8Q8TEV9 937 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-209ENST00000544610 EAF2Q96CJ1 260 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-209ENST00000544610 UNC93B1Q9H1C4 597 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 ABCF2Q9UG63 623 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 AGTPBP1Q9UPW5 1226 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 MGAMO43451 1857 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 LOC285556D6RIA3 1793 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 GPR75-ASB3A0A0A6YYF3 556 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 A0A1B0GUL7 405 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 TRIM75PA6NK02 468 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 HIP1O00291 1037 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 TNPO2O14787 897 aaKnown RBP7.93□□□□□ -1.14
CDCA3-209ENST00000544610 TRIM66O15016 1216 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 TBC1D12O60347 775 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 INHAP05111 366 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 ELNP15502 786 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 TIMM10P62072 90 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 MECOMQ03112 1051 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 PDE4DQ08499 809 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 FAM110CQ1W6H9 321 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 LRRFIP1Q32MZ4 808 aaKnown RBP7.93□□□□□ -1.14
CDCA3-209ENST00000544610 SPTY2D1Q68D10 685 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-209ENST00000544610 AACSQ86V21 672 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-209ENST00000544610 ZNF384Q8TF68 577 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 XAGE2Q96GT9 111 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 PAK6Q9NQU5 681 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-209ENST00000544610 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-209ENST00000544610 NR2E3Q9Y5X4 410 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 PTPRFP10586 1907 aa7.93□□□□□ -1.14
CDCA3-209ENST00000544610 MYH2Q9UKX2 1941 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 A0A1W2PPC1 479 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 MAP4K4O95819 1239 aaPredicted RBP7.92□□□□□ -1.14
CDCA3-209ENST00000544610 UQCRFS1P1P0C7P4 283 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 TFCP2Q12800 502 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 CCDC158Q5M9N0 1113 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 TREML2Q5T2D2 321 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 CASC1Q6TDU7 716 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 CCDC84Q86UT8 332 aaPredicted RBP7.92□□□□□ -1.14
CDCA3-209ENST00000544610 ANKRD13CQ8N6S4 541 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 PI4K2BQ8TCG2 481 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 ARID3AQ99856 593 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 TBC1D2Q9BYX2 928 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 OSBPL5Q9H0X9 879 aaPredicted RBP7.92□□□□□ -1.14
CDCA3-209ENST00000544610 IL1RAPL2Q9NP60 686 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
CDCA3-209ENST00000544610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.92□□□□□ -1.14
CDCA3-209ENST00000544610 FAM196BA6NMK8 535 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 SMARCA5O60264 1052 aaPredicted RBP7.91□□□□□ -1.14
CDCA3-209ENST00000544610 ARID4AP29374 1257 aaPredicted RBP7.91□□□□□ -1.14
CDCA3-209ENST00000544610 GSTO1P78417 241 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 PI16Q6UXB8 463 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 SPATA5Q8NB90 893 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 COA7Q96BR5 231 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 NSUN4Q96CB9 384 aaKnown RBP7.91□□□□□ -1.14
CDCA3-209ENST00000544610 EVI5LQ96CN4 794 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 DEFB118Q96PH6 123 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 HAUS7Q99871 368 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 BACH2Q9BYV9 841 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDCA3-209ENST00000544610 HMG20BQ9P0W2 317 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 DBNLQ9UJU6 430 aaKnown RBP7.91□□□□□ -1.14
CDCA3-209ENST00000544610 AK9Q5TCS8 1911 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 COL6A3P12111 3177 aa7.91□□□□□ -1.14
CDCA3-209ENST00000544610 MAST2Q6P0Q8 1798 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 EVI5O60447 810 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 CDC45O75419 566 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 TFRCP02786 760 aaKnown RBP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 ZFYP08048 801 aaPredicted RBP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 CAP2P40123 477 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 GCLCP48506 637 aaPredicted RBP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 SPP2Q13103 211 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 PABPC4Q13310 644 aaKnown RBP eCLIP7.9□□□□□ -1.142e-7■■■□□ 15.6
CDCA3-209ENST00000544610 RRP1BQ14684 758 aaKnown RBP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 TTF1Q15361 905 aaPredicted RBP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 SH3D19Q5HYK7 790 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 SNRKQ9NRH2 765 aa7.9□□□□□ -1.14
CDCA3-209ENST00000544610 HERC5Q9UII4 1024 aaKnown RBP7.9□□□□□ -1.14
CDCA3-209ENST00000544610 RAD50Q92878 1312 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 USP17L5A8MUK1 530 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 APBB1O00213 710 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 HMGCRP04035 888 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 LDHCP07864 332 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 GSPT1P15170 499 aaKnown RBP7.89□□□□□ -1.15
CDCA3-209ENST00000544610 SDSP20132 328 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 MCAMP43121 646 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 HMGCS2P54868 508 aa7.89□□□□□ -1.15
CDCA3-209ENST00000544610 C8orf34Q49A92 452 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms