RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SOX10P56693 466 aa27.87■■■□□ 2.05
CHFR-222ENST00000544093 ANKRD13CQ8N6S4 541 aa27.87■■■□□ 2.05
CHFR-222ENST00000544093 EMILIN3Q9NT22 766 aa27.87■■■□□ 2.05
CHFR-222ENST00000544093 CENPFP49454 3210 aa27.87■■■□□ 2.05
CHFR-222ENST00000544093 GSG1L2A8MUP6 293 aa27.86■■■□□ 2.05
CHFR-222ENST00000544093 LNPKQ9C0E8 428 aa27.86■■■□□ 2.05
CHFR-222ENST00000544093 CTGFP29279 349 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 CDK8P49336 464 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 SEPT2Q15019 361 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 SLC44A5Q8NCS7 719 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 DYNLL2Q96FJ2 89 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 NACAP1Q9BZK3 213 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 MYPNQ86TC9 1320 aa27.85■■■□□ 2.05
CHFR-222ENST00000544093 GUCY1A2P33402 732 aa27.84■■■□□ 2.05
CHFR-222ENST00000544093 EVX2Q03828 476 aa27.84■■■□□ 2.05
CHFR-222ENST00000544093 ZMYM1Q5SVZ6 1142 aa27.84■■■□□ 2.05
CHFR-222ENST00000544093 CHD1LQ86WJ1 897 aa27.84■■■□□ 2.05
CHFR-222ENST00000544093 RAET1EQ8TD07 263 aa27.84■■■□□ 2.05
CHFR-222ENST00000544093 SH2D4AQ9H788 454 aa27.84■■■□□ 2.05
CHFR-222ENST00000544093 RBBP6Q7Z6E9 1792 aaKnown RBP27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L15C9J2P7 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 PATL2C9JE40 543 aaKnown RBP27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L13C9JLJ4 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L11C9JVI0 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L18D6R9N7 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L22D6RA61 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L17D6RBQ6 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L19D6RCP7 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L20D6RJB6 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 M0R2C6 588 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 TNPO2O14787 897 aaKnown RBP27.83■■■□□ 2.05
CHFR-222ENST00000544093 IGHDP01880 384 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 APPP05067 770 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 TDO2P48775 406 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 NUCB1Q02818 461 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 USP17L24Q0WX57 530 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 B4GALNT3Q6L9W6 998 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 ZNF333Q96JL9 665 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 ZNF287Q9HBT7 754 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 MORF4L1Q9UBU8 362 aa27.83■■■□□ 2.05
CHFR-222ENST00000544093 CYP2D7A0A087X1C5 515 aa27.82■■■□□ 2.04
CHFR-222ENST00000544093 HERVK_113P62684 666 aa27.82■■■□□ 2.04
CHFR-222ENST00000544093 ACER1Q8TDN7 264 aa27.82■■■□□ 2.04
CHFR-222ENST00000544093 COA7Q96BR5 231 aa27.82■■■□□ 2.04
CHFR-222ENST00000544093 ARHGEF10LQ9HCE6 1279 aa27.82■■■□□ 2.04
CHFR-222ENST00000544093 ROBO3Q96MS0 1386 aa27.82■■■□□ 2.04
CHFR-222ENST00000544093 ZYXQ15942 572 aaKnown RBP27.81■■■□□ 2.04
CHFR-222ENST00000544093 P2RX7Q99572 595 aaKnown RBP27.81■■■□□ 2.04
CHFR-222ENST00000544093 ECM2O94769 699 aaPredicted RBP27.8■■■□□ 2.04
CHFR-222ENST00000544093 AKR1B1P15121 316 aa27.8■■■□□ 2.04
CHFR-222ENST00000544093 VCAM1P19320 739 aa27.8■■■□□ 2.04
CHFR-222ENST00000544093 ICA1Q05084 483 aa27.8■■■□□ 2.04
CHFR-222ENST00000544093 MINDY4BA8MYZ0 360 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 PRKCZQ05513 592 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 IFNL3Q8IZI9 196 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 GPRC5AQ8NFJ5 357 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 LPAR1Q92633 364 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 TMEM106CQ9BVX2 250 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 OSBPL3Q9H4L5 887 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 KANSL2Q9H9L4 492 aa27.79■■■□□ 2.04
CHFR-222ENST00000544093 KIAA0100Q14667 2235 aaKnown RBP27.78■■■□□ 2.04
CHFR-222ENST00000544093 IRF5Q13568 498 aa27.78■■■□□ 2.04
CHFR-222ENST00000544093 CATSPERGQ6ZRH7 1159 aa27.78■■■□□ 2.04
CHFR-222ENST00000544093 SLAIN1Q8ND83 568 aa27.78■■■□□ 2.04
CHFR-222ENST00000544093 SEC62Q99442 399 aaKnown RBP27.78■■■□□ 2.04
CHFR-222ENST00000544093 MKNK2Q9HBH9 465 aa27.78■■■□□ 2.04
CHFR-222ENST00000544093 EPB41L4AQ9HCS5 686 aaPredicted RBP27.78■■■□□ 2.04
CHFR-222ENST00000544093 HELLSQ9NRZ9 838 aa27.78■■■□□ 2.04
CHFR-222ENST00000544093 SLC3A2P08195 630 aaKnown RBP27.77■■■□□ 2.04
CHFR-222ENST00000544093 GRK4P32298 578 aa27.77■■■□□ 2.04
CHFR-222ENST00000544093 NAPBQ9H115 298 aa27.77■■■□□ 2.04
CHFR-222ENST00000544093 A0A1W2PRG0 241 aa27.76■■■□□ 2.03
CHFR-222ENST00000544093 LBX2Q6XYB7 198 aa27.76■■■□□ 2.03
CHFR-222ENST00000544093 TMX2Q9Y320 296 aa27.76■■■□□ 2.03
CHFR-222ENST00000544093 TRIM6-TRIM34B2RNG4 842 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 FLT3LGP49771 235 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 PLEKHM2Q8IWE5 1019 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 PXYLP1Q8TE99 480 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 SH3TC2Q8TF17 1288 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 RPAP3Q9H6T3 665 aaPredicted RBP27.75■■■□□ 2.03
CHFR-222ENST00000544093 RABGAP1Q9Y3P9 1069 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 DOCK3Q8IZD9 2030 aa27.75■■■□□ 2.03
CHFR-222ENST00000544093 SMIM22K7EJ46 135 aa27.74■■■□□ 2.03
CHFR-222ENST00000544093 MAPK4P31152 587 aa27.74■■■□□ 2.03
CHFR-222ENST00000544093 CCNA1P78396 465 aa27.74■■■□□ 2.03
CHFR-222ENST00000544093 RBPJLQ9UBG7 517 aa27.74■■■□□ 2.03
CHFR-222ENST00000544093 GABRQQ9UN88 632 aa27.74■■■□□ 2.03
CHFR-222ENST00000544093 GREB1LQ9C091 1923 aaPredicted RBP27.74■■■□□ 2.03
CHFR-222ENST00000544093 ERVK-9P63128 1117 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 ERVK-24P63145 666 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 UBXN2AP68543 259 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 PDE4BQ07343 736 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 CCAR1Q8IX12 1150 aaKnown RBP27.73■■■□□ 2.03
CHFR-222ENST00000544093 VCPKMTQ9H867 229 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 TXNRD2Q9NNW7 524 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 HOXC10Q9NYD6 342 aa27.73■■■□□ 2.03
CHFR-222ENST00000544093 RASA1P20936 1047 aa27.72■■■□□ 2.03
CHFR-222ENST00000544093 MCMDC2Q4G0Z9 681 aa27.72■■■□□ 2.03
CHFR-222ENST00000544093 SIAH1Q8IUQ4 282 aa27.72■■■□□ 2.03
CHFR-222ENST00000544093 ZNF444Q8N0Y2 327 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms