RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 NDUFAB1O14561 156 aa20.56■□□□□ 0.88
CCT4-204ENST00000544079 SPAG1Q07617 926 aa20.56■□□□□ 0.88
CCT4-204ENST00000544079 RALYLQ86SE5 291 aaKnown RBP20.56■□□□□ 0.88
CCT4-204ENST00000544079 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
CCT4-204ENST00000544079 NGDNQ8NEJ9 315 aaKnown RBP20.56■□□□□ 0.88
CCT4-204ENST00000544079 EPN1Q9Y6I3 576 aaPredicted RBP20.56■□□□□ 0.88
CCT4-204ENST00000544079 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
CCT4-204ENST00000544079 PPP1R12AO14974 1030 aaPredicted RBP20.55■□□□□ 0.88
CCT4-204ENST00000544079 NDUFA10O95299 355 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 ERCC3P19447 782 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 PDIA6Q15084 440 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 MIEF2Q96C03 454 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 MYO5AQ9Y4I1 1855 aaKnown RBP20.55■□□□□ 0.88
CCT4-204ENST00000544079 M0R2C6 588 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
CCT4-204ENST00000544079 MMGT1Q8N4V1 131 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 SLF1Q9BQI6 1058 aa20.55■□□□□ 0.88
CCT4-204ENST00000544079 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
CCT4-204ENST00000544079 CALRP27797 417 aaKnown RBP20.54■□□□□ 0.88
CCT4-204ENST00000544079 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
CCT4-204ENST00000544079 MRPL12P52815 198 aaKnown RBP20.54■□□□□ 0.88
CCT4-204ENST00000544079 ZNF572Q7Z3I7 529 aaPredicted RBP20.54■□□□□ 0.88
CCT4-204ENST00000544079 VEZTQ9HBM0 779 aa20.54■□□□□ 0.88
CCT4-204ENST00000544079 KIF3CO14782 793 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 ZFYP08048 801 aaPredicted RBP20.53■□□□□ 0.88
CCT4-204ENST00000544079 MYBL2P10244 700 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCT4-204ENST00000544079 AMOTQ4VCS5 1084 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 NOSTRINQ8IVI9 506 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 MAGEC3Q8TD91 643 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 VCPKMTQ9H867 229 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 GUCA1BQ9UMX6 200 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 REXO2Q9Y3B8 237 aaKnown RBP20.53■□□□□ 0.88
CCT4-204ENST00000544079 SRPRBQ9Y5M8 271 aaKnown RBP20.53■□□□□ 0.88
CCT4-204ENST00000544079 ATP1A1P05023 1023 aaKnown RBP20.53■□□□□ 0.88
CCT4-204ENST00000544079 NF2P35240 595 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 RILPL1Q5EBL4 403 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 CCDC50Q8IVM0 306 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
CCT4-204ENST00000544079 AIFM3Q96NN9 605 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 EHD4Q9H223 541 aa20.53■□□□□ 0.88
CCT4-204ENST00000544079 ANGEL1Q9UNK9 670 aaKnown RBP20.53■□□□□ 0.88
CCT4-204ENST00000544079 MYO1FO00160 1098 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 GCFC2P16383 781 aaKnown RBP20.52■□□□□ 0.88
CCT4-204ENST00000544079 APBA1Q02410 837 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 ZNF530Q6P9A1 599 aaPredicted RBP20.52■□□□□ 0.88
CCT4-204ENST00000544079 EMBQ6PCB8 327 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 EP400NLQ6ZTU2 488 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 GSDMAQ96QA5 445 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 SLIT3O75094 1523 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 RASSF9O75901 435 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 TNFRSF8P28908 595 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 ACTN3Q08043 901 aaPredicted RBP20.52■□□□□ 0.88
CCT4-204ENST00000544079 NNTQ13423 1086 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 WASF1Q92558 559 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 JAKMIP2Q96AA8 810 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 NUP88Q99567 741 aaPredicted RBP20.52■□□□□ 0.88
CCT4-204ENST00000544079 KLC4Q9NSK0 619 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 CEP131Q9UPN4 1083 aa20.52■□□□□ 0.88
CCT4-204ENST00000544079 FOXP2O15409 715 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 NAP1L1P55209 391 aaKnown RBP20.51■□□□□ 0.87
CCT4-204ENST00000544079 KRT83P78385 493 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 CRYMQ14894 314 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 SH3RF1Q7Z6J0 888 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
CCT4-204ENST00000544079 SAMM50Q9Y512 469 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 LTN1O94822 1766 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 KRT9P35527 623 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 EPHB4P54760 987 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 KDM7AQ6ZMT4 941 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 IP6K1Q92551 441 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 CAVIN3Q969G5 261 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 OSBP2Q969R2 916 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 EPN3Q9H201 632 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 ESF1Q9H501 851 aaKnown RBP20.51■□□□□ 0.87
CCT4-204ENST00000544079 HDAC6Q9UBN7 1215 aa20.51■□□□□ 0.87
CCT4-204ENST00000544079 PPP1R3GB7ZBB8 358 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 FGAP02671 866 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
CCT4-204ENST00000544079 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
CCT4-204ENST00000544079 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 SND1Q7KZF4 910 aaKnown RBP eCLIP20.5■□□□□ 0.872e-8■□□□□ 11.2
CCT4-204ENST00000544079 C1orf131Q8NDD1 294 aaKnown RBP20.5■□□□□ 0.87
CCT4-204ENST00000544079 N4BP3O15049 544 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 KRT86O43790 486 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 CD44P16070 742 aaKnown RBP20.5■□□□□ 0.87
CCT4-204ENST00000544079 KRT31Q15323 416 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 NTRK3Q16288 839 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 RUFY1Q96T51 708 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 TBC1D2BQ9UPU7 963 aa20.5■□□□□ 0.87
CCT4-204ENST00000544079 ADAMTS7Q9UKP4 1686 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 HSF2BPO75031 334 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 IFIT1P09914 478 aaKnown RBP20.49■□□□□ 0.87
CCT4-204ENST00000544079 SAFBQ15424 915 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCT4-204ENST00000544079 CAGE1Q8TC20 777 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 MYD88Q99836 296 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 FOXP1Q9H334 677 aaPredicted RBP20.49■□□□□ 0.87
CCT4-204ENST00000544079 ACTR5Q9H9F9 607 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms