RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MYH4Q9Y623 1939 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 ERICH2A1L162 156 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 B4E1Z4 1266 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 E7EWF7 191 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 CXCL11O14625 94 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 SLC27A2O14975 620 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 ORC4O43929 436 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 KDM4AO75164 1064 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 GJA5P36382 358 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 USP14P54578 494 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 HMGCS2P54868 508 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 INHBEP58166 350 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 JAG1P78504 1218 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 MAP2K1Q02750 393 aaPredicted RBP7.45□□□□□ -1.22
LTBR-212ENST00000543542 MTMR2Q13614 643 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 CREB3L3Q68CJ9 461 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 FASTKD5Q7L8L6 764 aaKnown RBP7.45□□□□□ -1.22
LTBR-212ENST00000543542 IQCA1Q86XH1 822 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 CLEC10AQ8IUN9 316 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 NEDD1Q8NHV4 660 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 NCOA7Q8NI08 942 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 ZKSCAN3Q9BRR0 538 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 UBAC1Q9BSL1 405 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 WDR18Q9BV38 432 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 CLIP2Q9UDT6 1046 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 MTMR7Q9Y216 660 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.45□□□□□ -1.22
LTBR-212ENST00000543542 AFG3L2Q9Y4W6 797 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 NEDD4P46934 1319 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 PHIPQ8WWQ0 1821 aa7.45□□□□□ -1.22
LTBR-212ENST00000543542 C19orf81C9J6K1 198 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 TTLL1O95922 423 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 EEF2P13639 858 aaKnown RBP7.44□□□□□ -1.22
LTBR-212ENST00000543542 GUCY1A2P33402 732 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 NT5C2P49902 561 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 BACE1P56817 501 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 FGD1P98174 961 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 PABPC4Q13310 644 aaKnown RBP eCLIP7.44□□□□□ -1.22
LTBR-212ENST00000543542 KRT32Q14532 448 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 SART3Q15020 963 aaKnown RBP7.44□□□□□ -1.22
LTBR-212ENST00000543542 NECTIN1Q15223 517 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 CCDC178Q5BJE1 867 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 SAMD1Q6SPF0 538 aaPredicted RBP7.44□□□□□ -1.22
LTBR-212ENST00000543542 DNAJC5GQ8N7S2 189 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 ACER1Q8TDN7 264 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 CHMP4CQ96CF2 233 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 CEP95Q96GE4 821 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 NBPF3Q9H094 633 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 UPF2Q9HAU5 1272 aaKnown RBP7.44□□□□□ -1.22
LTBR-212ENST00000543542 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 KCNH4Q9UQ05 1017 aa7.44□□□□□ -1.22
LTBR-212ENST00000543542 A0A0G2JLL6 359 aaPredicted RBP7.43□□□□□ -1.22
LTBR-212ENST00000543542 PDHXO00330 501 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 IFIT3O14879 490 aaKnown RBP7.43□□□□□ -1.22
LTBR-212ENST00000543542 NMT2O60551 498 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 TRPA1O75762 1119 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 ALDH1A1P00352 501 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 OSBPP22059 807 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 DGKZQ13574 1117 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
LTBR-212ENST00000543542 CHST3Q7LGC8 479 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 PRRT2Q7Z6L0 340 aaPredicted RBP7.43□□□□□ -1.22
LTBR-212ENST00000543542 IFNL1Q8IU54 200 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
LTBR-212ENST00000543542 PROCA1Q8NCQ7 364 aaPredicted RBP7.43□□□□□ -1.22
LTBR-212ENST00000543542 BRI3BPQ8WY22 251 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 NEK1Q96PY6 1258 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 TANGO6Q9C0B7 1094 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 KAT14Q9H8E8 782 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 MTMR4Q9NYA4 1195 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 ZSWIM5Q9P217 1185 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 NYAP2Q9P242 653 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 PNMA3Q9UL41 463 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 TACC3Q9Y6A5 838 aa7.43□□□□□ -1.22
LTBR-212ENST00000543542 PTPRFP10586 1907 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 A0A1W2PRG0 241 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 BTBD19C9JJ37 291 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 EPB41L2O43491 1005 aaKnown RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 PRC1O43663 620 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 FGRP09769 529 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 PSMA5P28066 241 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 MCM5P33992 734 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 HSPA4P34932 840 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 TM4SF4P48230 202 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 IRX3P78415 501 aaPredicted RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 IKQ13123 557 aaPredicted RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 WTAPQ15007 396 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 C8orf34Q49A92 452 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 TMEM67Q5HYA8 995 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 IFIT1BQ5T764 474 aaKnown RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 BLOC1S2Q6QNY1 142 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 CYB5R4Q7L1T6 521 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 ANKRD23Q86SG2 305 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 SPICE1Q8N0Z3 855 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 SMCR8Q8TEV9 937 aaPredicted RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 MS4A4AQ96JQ5 239 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms