RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
RTN3-212ENST00000543123 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
RTN3-212ENST00000543123 TCRBV5S4A2TA0A5A2 114 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 GLRX3O76003 335 aaKnown RBP15.84■□□□□ 0.13
RTN3-212ENST00000543123 SHMT1P34896 483 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 PLCD1P51178 756 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 ERVK-9P63128 1117 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 ERVK-24P63145 666 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 CCNA1P78396 465 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 ZYXQ15942 572 aaKnown RBP15.84■□□□□ 0.13
RTN3-212ENST00000543123 UBE2Q1Q7Z7E8 422 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 GPATCH3Q96I76 525 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 DEFB118Q96PH6 123 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 NUDT12Q9BQG2 462 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 PAGR1Q9BTK6 254 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.84■□□□□ 0.13
RTN3-212ENST00000543123 BOLA2Q9H3K6 86 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 ATP8A2Q9NTI2 1148 aa15.84■□□□□ 0.13
RTN3-212ENST00000543123 H0YGN5 161 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 XRCC5P13010 732 aaKnown RBP15.83■□□□□ 0.12
RTN3-212ENST00000543123 ADD2P35612 726 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 GABPAQ06546 454 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 LCORLQ8N3X6 602 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 HMX1Q9NP08 348 aaPredicted RBP15.83■□□□□ 0.12
RTN3-212ENST00000543123 DCP1AQ9NPI6 582 aaPredicted RBP15.83■□□□□ 0.12
RTN3-212ENST00000543123 GJD2Q9UKL4 321 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 NR2E3Q9Y5X4 410 aa15.83■□□□□ 0.12
RTN3-212ENST00000543123 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 MPHOSPH10O00566 681 aaKnown RBP15.82■□□□□ 0.12
RTN3-212ENST00000543123 MBD4O95243 580 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 VCAM1P19320 739 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 TMEM179Q6ZVK1 233 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 ANKLE1Q8NAG6 615 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 SDR42E1Q8WUS8 393 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 SH2D4AQ9H788 454 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 TXNRD2Q9NNW7 524 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 RBPJLQ9UBG7 517 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
RTN3-212ENST00000543123 ZKSCAN1P17029 563 aaPredicted RBP15.81■□□□□ 0.12
RTN3-212ENST00000543123 RGS2P41220 211 aa15.81■□□□□ 0.12
RTN3-212ENST00000543123 UBE3CQ15386 1083 aa15.81■□□□□ 0.12
RTN3-212ENST00000543123 CATSPERGQ6ZRH7 1159 aa15.81■□□□□ 0.12
RTN3-212ENST00000543123 PLEKHH3Q7Z736 793 aa15.81■□□□□ 0.12
RTN3-212ENST00000543123 EDC3Q96F86 508 aaKnown RBP15.81■□□□□ 0.12
RTN3-212ENST00000543123 CRISPLD2Q9H0B8 497 aa15.81■□□□□ 0.12
RTN3-212ENST00000543123 ARMT1Q9H993 441 aa15.81■□□□□ 0.12
RTN3-212ENST00000543123 CYP2B6P20813 491 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 SEPT2Q15019 361 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 C20orf194Q5TEA3 1177 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 LBX2Q6XYB7 198 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 GPR142Q7Z601 462 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 ACER1Q8TDN7 264 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 APBA2Q99767 749 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 RPAP3Q9H6T3 665 aaPredicted RBP15.8■□□□□ 0.12
RTN3-212ENST00000543123 ECHDC1Q9NTX5 307 aa15.8■□□□□ 0.12
RTN3-212ENST00000543123 MYH7P12883 1935 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 TRIB2Q92519 343 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 LPAR1Q92633 364 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 CCDC17Q96LX7 622 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 PORCNQ9H237 461 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 ARHGEF10LQ9HCE6 1279 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 IVNS1ABPQ9Y6Y0 642 aa15.79■□□□□ 0.12
RTN3-212ENST00000543123 MYH8P13535 1937 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 PLXNB2O15031 1838 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 EVI5O60447 810 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
RTN3-212ENST00000543123 GUCY1A2P33402 732 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 LRRFIP1Q32MZ4 808 aaKnown RBP15.78■□□□□ 0.12
RTN3-212ENST00000543123 MAP3K21Q5TCX8 1036 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 WDR78Q5VTH9 848 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 TANGO6Q9C0B7 1094 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 HOXC10Q9NYD6 342 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 COLQQ9Y215 455 aaPredicted RBP15.78■□□□□ 0.12
RTN3-212ENST00000543123 SLC4A4Q9Y6R1 1079 aa15.78■□□□□ 0.12
RTN3-212ENST00000543123 RANBP2P49792 3224 aaKnown RBP15.77■□□□□ 0.12
RTN3-212ENST00000543123 CYP2D6P10635 497 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 ICA1Q05084 483 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 MAP2K5Q13163 448 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 Q3C1V9 767 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 MORN1Q5T089 497 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 C12orf60Q5U649 245 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 MB21D1Q8N884 522 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 USP6NLQ92738 828 aa15.77■□□□□ 0.12
RTN3-212ENST00000543123 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.12
RTN3-212ENST00000543123 SLC15A5A6NIM6 579 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 SPDYE16A6NNV3 312 aaPredicted RBP15.76■□□□□ 0.11
RTN3-212ENST00000543123 PRKAB2O43741 272 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
RTN3-212ENST00000543123 PEX10O60683 326 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 COG2Q14746 738 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 SLC44A5Q8NCS7 719 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
RTN3-212ENST00000543123 NBPF3Q9H094 633 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
RTN3-212ENST00000543123 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms