RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 MCUR1Q96AQ8 359 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 NCKAP5LQ9HCH0 1330 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 WDR62O43379 1518 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 ZAP70P43403 619 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 NCAPH2Q6IBW4 605 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 DYMQ7RTS9 669 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 VPS52Q8N1B4 723 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
TNC-212ENST00000542877 CLNS1AP54105 237 aaKnown RBP14.54□□□□□ -0.08
TNC-212ENST00000542877 ETF1P62495 437 aaKnown RBP14.54□□□□□ -0.08
TNC-212ENST00000542877 SEPT6Q14141 434 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 ZSCAN26Q16670 478 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 GKAP1Q5VSY0 366 aaPredicted RBP14.54□□□□□ -0.08
TNC-212ENST00000542877 CCDC62Q6P9F0 684 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 CMA1P23946 247 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 RBM6P78332 1123 aaKnown RBP14.54□□□□□ -0.08
TNC-212ENST00000542877 RRAGAQ7L523 313 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 RGS12O14924 1447 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 LRRC8AQ8IWT6 810 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 PSMB7Q99436 277 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 LGR6Q9HBX8 967 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 ARHGEF10LQ9HCE6 1279 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 HSPA1LP34931 641 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 KRT71Q3SY84 523 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 LGSNQ5TDP6 509 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 CCDC105Q8IYK2 499 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 BLZF1Q9H2G9 400 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 FEZ2Q9UHY8 353 aaPredicted RBP14.54□□□□□ -0.08
TNC-212ENST00000542877 DDX41Q9UJV9 622 aaKnown RBP14.54□□□□□ -0.08
TNC-212ENST00000542877 PPP2R2CQ9Y2T4 447 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 MAST3O60307 1309 aa14.54□□□□□ -0.08
TNC-212ENST00000542877 STRN3Q13033 797 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 PNMA8AQ86V59 439 aaPredicted RBP14.53□□□□□ -0.08
TNC-212ENST00000542877 USP28Q96RU2 1077 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 PPP1R21Q6ZMI0 780 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 NOSTRINQ8IVI9 506 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 PKD2L1Q9P0L9 805 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 TBX22Q9Y458 520 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 KCNJ18B7U540 433 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 TOM1O60784 492 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 ZNF131P52739 623 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 SLC8A3P57103 927 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 EIF4A1P60842 406 aaKnown RBP14.53□□□□□ -0.08
TNC-212ENST00000542877 SP4Q02446 784 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 ITIH3Q06033 890 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 TRPC3Q13507 836 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 KCNJ12Q14500 433 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 DENND2CQ68D51 928 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 MAST1Q9Y2H9 1570 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 EXOC3O60645 756 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 PPP2R5EQ16537 467 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.08
TNC-212ENST00000542877 RABEP2Q9H5N1 569 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 FAM207AQ9NSI2 230 aaPredicted RBP14.53□□□□□ -0.08
TNC-212ENST00000542877 VPS54Q9P1Q0 977 aa14.53□□□□□ -0.08
TNC-212ENST00000542877 GOLGA8KD6RF30 607 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 C2CD5Q86YS7 1000 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 GPT2Q8TD30 523 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 AATFQ9NY61 560 aaKnown RBP eCLIP14.52□□□□□ -0.08
TNC-212ENST00000542877 CPSF2Q9P2I0 782 aaKnown RBP14.52□□□□□ -0.08
TNC-212ENST00000542877 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 PARP3Q9Y6F1 533 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 KIAA0556O60303 1618 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 SPATS2Q86XZ4 545 aaKnown RBP14.52□□□□□ -0.08
TNC-212ENST00000542877 PTPRTO14522 1441 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
TNC-212ENST00000542877 PSDA5PKW4 1024 aaPredicted RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 STK10O94804 968 aaKnown RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 UFL1O94874 794 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 DNM2P50570 870 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 ARHGEF2Q92974 986 aaKnown RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 HAUS4Q9H6D7 363 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 AMFRQ9UKV5 643 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 ZNF215Q9UL58 517 aaPredicted RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 MYCT1Q8N699 235 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 STAMQ92783 540 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 MRRFQ96E11 262 aaKnown RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 TPCN1Q9ULQ1 816 aa14.52□□□□□ -0.09
TNC-212ENST00000542877 HARSP12081 509 aaKnown RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 REXO1Q8N1G1 1221 aaKnown RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 GABPB2Q8TAK5 448 aaPredicted RBP14.52□□□□□ -0.09
TNC-212ENST00000542877 PTH1RQ03431 593 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 MORC3Q14149 939 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 SDCCAG8Q86SQ7 713 aaPredicted RBP14.51□□□□□ -0.09
TNC-212ENST00000542877 NELFCDQ8IXH7 590 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 ZNF654Q8IZM8 581 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 RNF40O75150 1001 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 CNBD1Q8NA66 436 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 USP44Q9H0E7 712 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 MRPL44Q9H9J2 332 aaKnown RBP14.51□□□□□ -0.09
TNC-212ENST00000542877 KDM3AQ9Y4C1 1321 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 NEURL1BA8MQ27 555 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 I3L4J1 428 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 GCNT3O95395 438 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 KRT15P19012 456 aa14.51□□□□□ -0.09
TNC-212ENST00000542877 RASSF2P50749 326 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms