RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 USP17L2Q6R6M4 530 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 IFNL3Q8IZI9 196 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 SMCR8Q8TEV9 937 aaPredicted RBP7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 CCDC17Q96LX7 622 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 FEZ1Q99689 392 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 NACAP1Q9BZK3 213 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 KIAA1683Q9H0B3 1180 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 HELLSQ9NRZ9 838 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 RBBP6Q7Z6E9 1792 aaKnown RBP7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 MPHOSPH10O00566 681 aaKnown RBP7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 APPP05067 770 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 PDE4AP27815 886 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 GCLCP48506 637 aaPredicted RBP7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 PRMT2P55345 433 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 FAM110CQ1W6H9 321 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 ACER1Q8TDN7 264 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 ARHGAP39Q9C0H5 1083 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 NAPBQ9H115 298 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 ASCC2Q9H1I8 757 aaPredicted RBP7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 A0A0G2JMZ2 1700 aa7.49□□□□□ -1.21
LRTOMT-220ENST00000542846 LAMA4Q16363 1823 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 PARP14Q460N5 1801 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 A0A0D9SFI3 127 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 A0A1W2PRG0 241 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 MINDY4BA8MYZ0 360 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 FOXP2O15409 715 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 VCAM1P19320 739 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 RASA1P20936 1047 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 CTGFP29279 349 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 PSMC4P43686 418 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 FCGRTP55899 365 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 HERVK_113P62684 666 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 IRX3P78415 501 aaPredicted RBP7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 ICA1Q05084 483 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 NMIQ13287 307 aaPredicted RBP7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 ZYXQ15942 572 aaKnown RBP7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 MCMDC2Q4G0Z9 681 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 CCDC129Q6ZRS4 1044 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 RILPL2Q969X0 211 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 TRIM47Q96LD4 638 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 FAM227BQ96M60 508 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 SH2D4AQ9H788 454 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 ZNF287Q9HBT7 754 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 ARHGEF10LQ9HCE6 1279 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 MORF4L1Q9UBU8 362 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 SRRDQ9UH36 339 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 PTCH2Q9Y6C5 1203 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 RLFQ13129 1914 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 MYH4Q9Y623 1939 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 ZMYM6O95789 1325 aa7.48□□□□□ -1.21
LRTOMT-220ENST00000542846 PLIN4Q96Q06 1357 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 HIP1O00291 1037 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 FMNL1O95466 1100 aaPredicted RBP7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 SLC3A2P08195 630 aaKnown RBP7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 SDSP20132 328 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 HOXD10P28358 340 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 PDE4BQ07343 736 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 PPARAQ07869 468 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 ALX1Q15699 326 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 TTC22Q5TAA0 569 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 VPS53Q5VIR6 699 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 CATSPERGQ6ZRH7 1159 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 CLEC10AQ8IUN9 316 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 SIAH1Q8IUQ4 282 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 ANKRD13CQ8N6S4 541 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 LPAR1Q92633 364 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 ARMC5Q96C12 935 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 P2RX7Q99572 595 aaKnown RBP7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 VCPKMTQ9H867 229 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 KANSL2Q9H9L4 492 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 MKNK2Q9HBH9 465 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 ANAPC4Q9UJX5 808 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 TMX2Q9Y320 296 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 CCDC171Q6TFL3 1326 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 MYPNQ86TC9 1320 aa7.47□□□□□ -1.21
LRTOMT-220ENST00000542846 BRCA2P51587 3418 aa7.46□□□□□ -1.21
LRTOMT-220ENST00000542846 PLXNB2O15031 1838 aa7.46□□□□□ -1.21
LRTOMT-220ENST00000542846 DOCK3Q8IZD9 2030 aa7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 IGKV6D-41A0A0C4DH26 115 aa7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 WDR46O15213 610 aaKnown RBP7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 HSPD1P10809 573 aaKnown RBP7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 EEF2P13639 858 aaKnown RBP7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 GSPT1P15170 499 aaKnown RBP7.46□□□□□ -1.22
LRTOMT-220ENST00000542846 RGS19P49795 217 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms