RNA–Protein interactions for RNA: ENST00000542710.3

PPME1-207, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 3

Gene PPME1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-207ENST00000542710 TRIM29Q14134 588 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 RASA3Q14644 834 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 ABCB5Q2M3G0 1257 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 TMEM179Q6ZVK1 233 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 CYB5R4Q7L1T6 521 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 ZBED3Q96IU2 234 aaPredicted RBP16.08■□□□□ 0.16
PPME1-207ENST00000542710 LZTS2Q9BRK4 669 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 ZKSCAN3Q9BRR0 538 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.16
PPME1-207ENST00000542710 ATP6V1DQ9Y5K8 247 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 TAF6LQ9Y6J9 622 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 PITPNM2Q9BZ72 1349 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 ATRNL1Q5VV63 1379 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 NAV1Q8NEY1 1877 aa16.08■□□□□ 0.16
PPME1-207ENST00000542710 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
PPME1-207ENST00000542710 RASA1P20936 1047 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 PDIA3P30101 505 aaKnown RBP16.07■□□□□ 0.16
PPME1-207ENST00000542710 EVCP57679 992 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 ATP2B2Q01814 1243 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 ME3Q16798 604 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 RTN1Q16799 776 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 ANGEL2Q5VTE6 544 aaKnown RBP16.07■□□□□ 0.16
PPME1-207ENST00000542710 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 L3MBTL3Q96JM7 780 aaPredicted RBP16.07■□□□□ 0.16
PPME1-207ENST00000542710 DEFB129Q9H1M3 183 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 ARHGEF10LQ9HCE6 1279 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
PPME1-207ENST00000542710 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
PPME1-207ENST00000542710 DDTLA6NHG4 134 aaPredicted RBP16.06■□□□□ 0.16
PPME1-207ENST00000542710 H3BQV1 296 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 EPHX2P34913 555 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 EPS15P42566 896 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 MAP3K14Q99558 947 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
PPME1-207ENST00000542710 INCENPQ9NQS7 918 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 MYH1P12882 1939 aa16.06■□□□□ 0.16
PPME1-207ENST00000542710 PPP1R12BO60237 982 aaPredicted RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 ANTXR2P58335 489 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 GABPAQ06546 454 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 ZNF341Q9BYN7 854 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 BAZ2AQ9UIF9 1905 aaKnown RBP16.05■□□□□ 0.16
PPME1-207ENST00000542710 TIAM2Q8IVF5 1701 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 COL4A5P29400 1685 aa16.05■□□□□ 0.16
PPME1-207ENST00000542710 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
PPME1-207ENST00000542710 GOLGA6L22H0YM25 854 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 ASNSP08243 561 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 PRELPP51888 382 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 EAPPQ56P03 285 aaPredicted RBP16.04■□□□□ 0.16
PPME1-207ENST00000542710 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
PPME1-207ENST00000542710 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 PNMA1Q8ND90 353 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 PICK1Q9NRD5 415 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 GGA3Q9NZ52 723 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 SYNPO2Q9UMS6 1093 aa16.04■□□□□ 0.16
PPME1-207ENST00000542710 LAMB1P07942 1786 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 RAD21O60216 631 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 PARP1P09874 1014 aaKnown RBP16.03■□□□□ 0.16
PPME1-207ENST00000542710 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
PPME1-207ENST00000542710 GNL2Q13823 731 aaKnown RBP16.03■□□□□ 0.16
PPME1-207ENST00000542710 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
PPME1-207ENST00000542710 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 GOPCQ9HD26 462 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 MTMR4Q9NYA4 1195 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 CLIP2Q9UDT6 1046 aa16.03■□□□□ 0.16
PPME1-207ENST00000542710 CTNND1O60716 968 aaKnown RBP16.02■□□□□ 0.16
PPME1-207ENST00000542710 GJB2P29033 226 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 SHMT1P34896 483 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 ICA1Q05084 483 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 TRAF1Q13077 416 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.16
PPME1-207ENST00000542710 SEC23AQ15436 765 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 KRT26Q7Z3Y9 468 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 ZFPM1Q8IX07 1006 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 SLC44A5Q8NCS7 719 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 GBP4Q96PP9 640 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 NYAP2Q9P242 653 aa16.02■□□□□ 0.16
PPME1-207ENST00000542710 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
PPME1-207ENST00000542710 PTMSP20962 102 aa16.01■□□□□ 0.15
PPME1-207ENST00000542710 IREB2P48200 963 aaKnown RBP16.01■□□□□ 0.15
PPME1-207ENST00000542710 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
PPME1-207ENST00000542710 SCRN1Q12765 414 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms