RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	NBPF3	Q9H094	633 aa		10.9	□□□□□ -0.66
POLE-218	ENST00000542362	EMILIN3	Q9NT22	766 aa		10.9	□□□□□ -0.66
POLE-218	ENST00000542362	PATL2	C9JE40	543 aa	Known RBP	10.89	□□□□□ -0.67
POLE-218	ENST00000542362	CXCL11	O14625	94 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	ASNS	P08243	561 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	RASA1	P20936	1047 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	HAND2	P61296	217 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	TMED8	Q6PL24	325 aa	Predicted RBP	10.89	□□□□□ -0.67
POLE-218	ENST00000542362	ANKRD23	Q86SG2	305 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	CERS3	Q8IU89	383 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	REM2	Q8IYK8	340 aa	Predicted RBP	10.89	□□□□□ -0.67
POLE-218	ENST00000542362	CFHR5	Q9BXR6	569 aa		10.89	□□□□□ -0.67
POLE-218	ENST00000542362	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.89	□□□□□ -0.67
POLE-218	ENST00000542362	CCDC171	Q6TFL3	1326 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	FKTN	O75072	461 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	HSPD1	P10809	573 aa	Known RBP	10.88	□□□□□ -0.67
POLE-218	ENST00000542362	INHBE	P58166	350 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	SBK1	Q52WX2	424 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	FAM47A	Q5JRC9	791 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	WDR18	Q9BV38	432 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	NAPB	Q9H115	298 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	AGTPBP1	Q9UPW5	1226 aa		10.88	□□□□□ -0.67
POLE-218	ENST00000542362	NMT2	O60551	498 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	TLR2	O60603	784 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	ALDH1A1	P00352	501 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	BACE1	P56817	501 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	PPARA	Q07869	468 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	MCMDC2	Q4G0Z9	681 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	SH3D19	Q5HYK7	790 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	C17orf99	Q6UX52	265 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	OTOP1	Q7RTM1	612 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	TBC1D10C	Q8IV04	446 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.87	□□□□□ -0.67
POLE-218	ENST00000542362	ZFYVE28	Q9HCC9	887 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	HELLS	Q9NRZ9	838 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	TAF6L	Q9Y6J9	622 aa		10.87	□□□□□ -0.67
POLE-218	ENST00000542362	ALPK3	Q96L96	1907 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	USP17L10	C9JJH3	530 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	FGA	P02671	866 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	BCR	P11274	1271 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	EEF2	P13639	858 aa	Known RBP	10.86	□□□□□ -0.67
POLE-218	ENST00000542362	ATP2B2	Q01814	1243 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	SP3	Q02447	781 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	OTUD7B	Q6GQQ9	843 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	SPICE1	Q8N0Z3	855 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	ANKRD13C	Q8N6S4	541 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	CCDC136	Q96JN2	1154 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	FEZ1	Q99689	392 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	AS3MT	Q9HBK9	375 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	TXNRD2	Q9NNW7	524 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	DIAPH3	Q9NSV4	1193 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	SWAP70	Q9UH65	585 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
POLE-218	ENST00000542362	TRIM17	Q9Y577	477 aa		10.86	□□□□□ -0.67
POLE-218	ENST00000542362	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.86	□□□□□ -0.67
POLE-218	ENST00000542362	NEDD4	P46934	1319 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	GNAT2	P19087	354 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	VCAM1	P19320	739 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	CHML	P26374	656 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	PTH1R	Q03431	593 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	ICA1	Q05084	483 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	COL9A3	Q14050	684 aa	Predicted RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	TMEM179	Q6ZVK1	233 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	FASTKD5	Q7L8L6	764 aa	Known RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	CTU1	Q7Z7A3	348 aa	Known RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	LRRC47	Q8N1G4	583 aa	Known RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	NUP88	Q99567	741 aa	Predicted RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	P2RX7	Q99572	595 aa	Known RBP	10.85	□□□□□ -0.67
POLE-218	ENST00000542362	CABP5	Q9NP86	173 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	GABRQ	Q9UN88	632 aa		10.85	□□□□□ -0.67
POLE-218	ENST00000542362	IGKV6D-41	A0A0C4DH26	115 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	CNMD	O75829	334 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	LACTB	P83111	547 aa	Predicted RBP	10.84	□□□□□ -0.67
POLE-218	ENST00000542362	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.84	□□□□□ -0.67
POLE-218	ENST00000542362	GIMAP6	Q6P9H5	292 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	USP17L2	Q6R6M4	530 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	AMOTL1	Q8IY63	956 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	CEP95	Q96GE4	821 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	DDRGK1	Q96HY6	314 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	TRIM47	Q96LD4	638 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	PARK7	Q99497	189 aa	Known RBP	10.84	□□□□□ -0.67
POLE-218	ENST00000542362	PAGR1	Q9BTK6	254 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.84	□□□□□ -0.67
POLE-218	ENST00000542362	FBXO28	Q9NVF7	368 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	TMOD4	Q9NZQ9	345 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	PTCH2	Q9Y6C5	1203 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	ZNF236	Q9UL36	1845 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	LRRC37A2	A6NM11	1700 aa		10.84	□□□□□ -0.67
POLE-218	ENST00000542362	MKI67	P46013	3256 aa	Known RBP	10.83	□□□□□ -0.67
POLE-218	ENST00000542362	PLIN4	Q96Q06	1357 aa		10.83	□□□□□ -0.68
POLE-218	ENST00000542362	RAD21	O60216	631 aa		10.83	□□□□□ -0.68
POLE-218	ENST00000542362	MYC	P01106	439 aa	Predicted RBP	10.83	□□□□□ -0.68
POLE-218	ENST00000542362	TAL1	P17542	331 aa	Predicted RBP	10.83	□□□□□ -0.68
POLE-218	ENST00000542362		Q3C1V9	767 aa		10.83	□□□□□ -0.68
POLE-218	ENST00000542362	RRP12	Q5JTH9	1297 aa	Known RBP	10.83	□□□□□ -0.68
POLE-218	ENST00000542362	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.83	□□□□□ -0.68
POLE-218	ENST00000542362	C12orf42	Q96LP6	360 aa		10.83	□□□□□ -0.68

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