RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SERPINB13Q9UIV8 391 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 NID2Q14112 1375 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
SCG3-202ENST00000542355 HLA-DOAP06340 250 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
SCG3-202ENST00000542355 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 TFIP11Q9UBB9 837 aaKnown RBP12.81□□□□□ -0.36
SCG3-202ENST00000542355 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 STX8Q9UNK0 236 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 DDAH1O94760 285 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 KRT85P78386 507 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 GSE1Q14687 1217 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 NBPF11Q86T75 865 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
SCG3-202ENST00000542355 TRIM22Q8IYM9 498 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 NEDD1Q8NHV4 660 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 GPT2Q8TD30 523 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 GADD45BO75293 160 aaPredicted RBP12.8□□□□□ -0.36
SCG3-202ENST00000542355 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 GUCY1A2P33402 732 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
SCG3-202ENST00000542355 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
SCG3-202ENST00000542355 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
SCG3-202ENST00000542355 LAMB1P07942 1786 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 DDTLA6NHG4 134 aaPredicted RBP12.79□□□□□ -0.36
SCG3-202ENST00000542355 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
SCG3-202ENST00000542355 STK36Q9NRP7 1315 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 NAV1Q8NEY1 1877 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 PLEKHA8P1O95397 391 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 RASSF7Q02833 373 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 WASF1Q92558 559 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 TMEM47Q9BQJ4 181 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 PI4KBQ9UBF8 816 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
SCG3-202ENST00000542355 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 STK25O00506 426 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 AKR1B1P15121 316 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
SCG3-202ENST00000542355 TRIM29Q14134 588 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 KRT40Q6A162 431 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 SH3BP5LQ7L8J4 393 aa12.78□□□□□ -0.36
SCG3-202ENST00000542355 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCG3-202ENST00000542355 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
SCG3-202ENST00000542355 hCG_1642624A0A1W2PR95 340 aa12.77□□□□□ -0.36
SCG3-202ENST00000542355 DEXIO95424 95 aa12.77□□□□□ -0.36
SCG3-202ENST00000542355 SHMT1P34896 483 aa12.77□□□□□ -0.36
SCG3-202ENST00000542355 FUT2Q10981 343 aa12.77□□□□□ -0.36
SCG3-202ENST00000542355 TMTC3Q6ZXV5 915 aa12.77□□□□□ -0.36
SCG3-202ENST00000542355 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.36
SCG3-202ENST00000542355 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.36
SCG3-202ENST00000542355 UTRNP46939 3433 aa12.77□□□□□ -0.36
SCG3-202ENST00000542355 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
SCG3-202ENST00000542355 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 KIF5BP33176 963 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 PRELPP51888 382 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
SCG3-202ENST00000542355 TNIP1Q15025 636 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.37
SCG3-202ENST00000542355 SPATA32Q96LK8 384 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.37
SCG3-202ENST00000542355 EHD4Q9H223 541 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 TMOD2Q9NZR1 351 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 CFAP45Q9UL16 551 aa12.77□□□□□ -0.37
SCG3-202ENST00000542355 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 ENTPD3O75355 529 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 MBD3O95983 291 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 UBE2HP62256 183 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 ZNF70Q9UC06 446 aaPredicted RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 CDK5RAP2Q96SN8 1893 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 PRPF3O43395 683 aaKnown RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
SCG3-202ENST00000542355 STAG2Q8N3U4 1231 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 MAP3K14Q99558 947 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 KCNJ14Q9UNX9 436 aa12.76□□□□□ -0.37
SCG3-202ENST00000542355 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
SCG3-202ENST00000542355 ZNF646O15015 1829 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms