RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 KCNQ3O43525 872 aa13.89□□□□□ -0.19
KDM3A-216ENST00000542128 STX10O60499 249 aa13.89□□□□□ -0.19
KDM3A-216ENST00000542128 CRKLP46109 303 aaKnown RBP13.89□□□□□ -0.19
KDM3A-216ENST00000542128 STX17P56962 302 aa13.89□□□□□ -0.19
KDM3A-216ENST00000542128 SCRN1Q12765 414 aa13.89□□□□□ -0.19
KDM3A-216ENST00000542128 HINFPQ9BQA5 517 aa13.89□□□□□ -0.19
KDM3A-216ENST00000542128 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 TBC1D8O95759 1140 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 TRIM21P19474 475 aaKnown RBP13.88□□□□□ -0.19
KDM3A-216ENST00000542128 GOLGA8FQ08AF8 430 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 GOLGA8DPQ0D2H9 430 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 TDRD12Q587J7 1177 aaKnown RBP13.88□□□□□ -0.19
KDM3A-216ENST00000542128 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 ATL3Q6DD88 541 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 IL17REQ8NFR9 667 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 SAR1BQ9Y6B6 198 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 HOXB7P09629 217 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 RNF217Q8TC41 542 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 BABAM1Q9NWV8 329 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.191e-7■■□□□ 13.7
KDM3A-216ENST00000542128 TAF5LO75529 589 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 ZMYND10O75800 440 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 TIMM10P62072 90 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 SH2D4BQ5SQS7 431 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 CREB3L3Q68CJ9 461 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
KDM3A-216ENST00000542128 SPAG5Q96R06 1193 aa13.88□□□□□ -0.19
KDM3A-216ENST00000542128 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 CHL1O00533 1208 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 PAX7P23759 505 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 KANK3Q6NY19 840 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 Q6ZUG5 572 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 ZBTB10Q96DT7 871 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 SPAG1Q07617 926 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 SEPT6Q14141 434 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 NYAP1Q6ZVC0 841 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 CACNA2D4Q7Z3S7 1137 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 RNF10Q8N5U6 811 aaKnown RBP13.87□□□□□ -0.19
KDM3A-216ENST00000542128 TRIM7Q9C029 511 aa13.87□□□□□ -0.19
KDM3A-216ENST00000542128 MACROD2A1Z1Q3 448 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 HGSO14964 777 aaPredicted RBP13.86□□□□□ -0.19
KDM3A-216ENST00000542128 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
KDM3A-216ENST00000542128 RUFY4Q6ZNE9 571 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 TMTC1Q8IUR5 882 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 EGFL6Q8IUX8 553 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 CCDC155Q8N6L0 562 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 ZNF594Q96JF6 807 aaPredicted RBP13.86□□□□□ -0.19
KDM3A-216ENST00000542128 SLF1Q9BQI6 1058 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 CEP131Q9UPN4 1083 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 ZBTB1Q9Y2K1 713 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 NFE2L3Q9Y4A8 694 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 MMP14P50281 582 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 PDCLQ13371 301 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 TCIRG1Q13488 830 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 ZFYVE27Q5T4F4 411 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 SLC30A9Q6PML9 568 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 CD248Q9HCU0 757 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 ZNF202O95125 648 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 TFCP2Q12800 502 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 ME3Q16798 604 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 UBLCP1Q8WVY7 318 aaPredicted RBP13.86□□□□□ -0.19
KDM3A-216ENST00000542128 STIM2Q9P246 746 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 THRAP3Q9Y2W1 955 aaKnown RBP13.86□□□□□ -0.19
KDM3A-216ENST00000542128 MAGEB6P1A0A0J9YX57 407 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 EYA2O00167 538 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 SLMAPQ14BN4 828 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 SWT1Q5T5J6 900 aaKnown RBP13.86□□□□□ -0.19
KDM3A-216ENST00000542128 TTLL7Q6ZT98 887 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 PARP9Q8IXQ6 854 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 SLC35F6Q8N357 371 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 TCHPQ9BT92 498 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 KIF9Q9HAQ2 790 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 BATF3Q9NR55 127 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 FAM114A2Q9NRY5 505 aa13.86□□□□□ -0.19
KDM3A-216ENST00000542128 SMIM23A6NLE4 172 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 SGSM2O43147 1006 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 CREB3O43889 395 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 TMED8Q6PL24 325 aaPredicted RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 FAM43BQ6ZT52 329 aaPredicted RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 THOC1Q96FV9 657 aaKnown RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 C6orf163Q5TEZ5 329 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 SPATA24Q86W54 205 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 G3BP2Q9UN86 482 aaKnown RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 CAND2O75155 1236 aa13.85□□□□□ -0.19
KDM3A-216ENST00000542128 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
KDM3A-216ENST00000542128 DLGAP5Q15398 846 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms