RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 CCDC12Q8WUD4 166 aaPredicted RBP7.71□□□□□ -1.18
NKRF-204ENST00000542113 DHX58Q96C10 678 aa7.71□□□□□ -1.18
NKRF-204ENST00000542113 ZSCAN10Q96SZ4 725 aaPredicted RBP7.71□□□□□ -1.18
NKRF-204ENST00000542113 PHF20Q9BVI0 1012 aa7.71□□□□□ -1.18
NKRF-204ENST00000542113 FHOD1Q9Y613 1164 aa7.71□□□□□ -1.18
NKRF-204ENST00000542113 ITGB4P16144 1822 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 PRR29P0C7W0 189 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 EIF5P55010 431 aaKnown RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 NR5A1Q13285 461 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 SEC23AQ15436 765 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 SPECC1Q5M775 1068 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 SH3RF1Q7Z6J0 888 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 TMTC1Q8IUR5 882 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 CTCFLQ8NI51 663 aaPredicted RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 GBP3Q9H0R5 595 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 CCDC87Q9NVE4 849 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 ZNF446Q9NWS9 450 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 BCORQ6W2J9 1755 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 CCDC151A5D8V7 595 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 FOXN1O15353 648 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 CALML3P27482 149 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 UBE4AQ14139 1066 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 CAVIN4Q5BKX8 364 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 CDKAL1Q5VV42 579 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 ZKSCAN3Q9BRR0 538 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 ZNF804BA4D1E1 1349 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 MINDY4BA8MYZ0 360 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 PRKAB2O43741 272 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 MFAP3LO75121 409 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 ATP2B1P20020 1258 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 GTF2E1P29083 439 aaPredicted RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 ADKP55263 362 aaKnown RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 TTC38Q5R3I4 469 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 TRMT44Q8IYL2 757 aaKnown RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 FAM177A1Q8N128 213 aaPredicted RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 PAGE5Q96GU1 130 aa7.7□□□□□ -1.18
NKRF-204ENST00000542113 ADD3Q9UEY8 706 aaKnown RBP7.7□□□□□ -1.18
NKRF-204ENST00000542113 KIF5BP33176 963 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 ATP2C1P98194 919 aaPredicted RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 CUL4BQ13620 913 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 RSRC2Q7L4I2 434 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 TXLNBQ8N3L3 684 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 SYMPKQ92797 1274 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 KIFC2Q96AC6 838 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 SAMSN1Q9NSI8 373 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 BTG4Q9NY30 223 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 XIRP1Q702N8 1843 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 LAMB2P55268 1798 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 COL14A1Q05707 1796 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 NHSL1Q5SYE7 1610 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 PDS5AQ29RF7 1337 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 GTPBP6O43824 516 aaPredicted RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 MYL1P05976 194 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 FECHP22830 423 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 BCAMP50895 628 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 PIP4K2BP78356 416 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 CHRNDQ07001 517 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 DPYDQ12882 1025 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 ZNF827Q17R98 1081 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 CCDC178Q5BJE1 867 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 SUSD4Q5VX71 490 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 ARL6IP4Q66PJ3 421 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 CC2D1AQ6P1N0 951 aaPredicted RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 TOGARAM2Q6ZUX3 1019 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 TMTC3Q6ZXV5 915 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 SRGAP1Q7Z6B7 1085 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 MSL3Q8N5Y2 521 aaKnown RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 MIGA1Q8NAN2 632 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 SYTL4Q96C24 671 aaPredicted RBP7.69□□□□□ -1.18
NKRF-204ENST00000542113 ACBD3Q9H3P7 528 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 RWDD2AQ9UIY3 292 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 CDC23Q9UJX2 597 aa7.69□□□□□ -1.18
NKRF-204ENST00000542113 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 CTAGE9A4FU28 777 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 RGL2O15211 777 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 ORC4O43929 436 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 EIF3JO75822 258 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 FGRP09769 529 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 PBX1P40424 430 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 CHMP4BP1P59074 171 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 GRIN1Q05586 938 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 STIM1Q13586 685 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 RASGRP2Q7LDG7 609 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 ENAHQ8N8S7 591 aaPredicted RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 NKX2-3Q8TAU0 364 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 OXER1Q8TDS5 423 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 SLC4A9Q96Q91 983 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 INCENPQ9NQS7 918 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 VPS54Q9P1Q0 977 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 ADGRG1Q9Y653 693 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 DUOX1Q9NRD9 1551 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 MYO5AQ9Y4I1 1855 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 LONP1P36776 959 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 AFMP43652 599 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 PAK1Q13153 545 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 WHAMMP3Q1A5X7 153 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 TSR1Q2NL82 804 aaKnown RBP7.68□□□□□ -1.18
NKRF-204ENST00000542113 KLHL10Q6JEL2 608 aa7.68□□□□□ -1.18
NKRF-204ENST00000542113 CYP26C1Q6V0L0 522 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms