RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 RTFDC1Q9BY42 306 aaPredicted RBP12.45□□□□□ -0.42
NECAP1-206ENST00000542095 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
NECAP1-206ENST00000542095 A0A087WWV3 80 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 PLCG2P16885 1265 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 TFAP4Q01664 338 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 DGKHQ86XP1 1220 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 KAT14Q9H8E8 782 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 CABP5Q9NP86 173 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 PTPREP23469 700 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 BTDP43251 543 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 SRBD1Q8N5C6 995 aaKnown RBP12.44□□□□□ -0.42
NECAP1-206ENST00000542095 AOPEPQ8N6M6 819 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 ZNF287Q9HBT7 754 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 FBXO2Q9UK22 296 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-206ENST00000542095 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 PCDHB6Q9Y5E3 794 aa12.44□□□□□ -0.42
NECAP1-206ENST00000542095 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-206ENST00000542095 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 DPCR1Q3MIW9 517 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 RCSD1Q6JBY9 416 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 SP8Q8IXZ3 490 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 PROM2Q8N271 834 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 SHISA4Q96DD7 197 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 BAZ2BQ9UIF8 2168 aaKnown RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 hCG_1642624A0A1W2PR95 340 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 MFSD14BQ5SR56 506 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 KCNF1Q9H3M0 494 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
NECAP1-206ENST00000542095 SRPRBQ9Y5M8 271 aaKnown RBP12.43□□□□□ -0.42
NECAP1-206ENST00000542095 TRIM75PA6NK02 468 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 BIN1O00499 593 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 BMP15O95972 392 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 TSPY3P0CV98 308 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 TSPY8P0CW00 308 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 SCG2P13521 617 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 ATP2B1P20020 1258 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 TPM4P67936 248 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-206ENST00000542095 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 MYH8P13535 1937 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 SMTNL1A8MU46 457 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 PTGS1P23219 599 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.42
NECAP1-206ENST00000542095 PFKFB3Q16875 520 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-206ENST00000542095 CCDC186Q7Z3E2 898 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
NECAP1-206ENST00000542095 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
NECAP1-206ENST00000542095 GNAQP50148 359 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 PLCD1P51178 756 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 QSER1Q2KHR3 1735 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 GAKO14976 1311 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 PLSCR1O15162 318 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 TERF1P54274 439 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 NLRP5P59047 1200 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 PNOCQ13519 176 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 GRM4Q14833 912 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 COA1Q9GZY4 146 aa12.41□□□□□ -0.42
NECAP1-206ENST00000542095 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 SPECC1Q5M775 1068 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 METTL16Q86W50 562 aaKnown RBP12.4□□□□□ -0.42
NECAP1-206ENST00000542095 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 TNFRSF25Q93038 417 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 SPTLC3Q9NUV7 552 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-206ENST00000542095 FLT1P17948 1338 aa12.4□□□□□ -0.42
NECAP1-206ENST00000542095 USP17L3A6NCW0 530 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 USP17L4A6NCW7 530 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 FAM205CA6NFA0 338 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 NPR1P16066 1061 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 RASA1P20936 1047 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 CALML3P27482 149 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 GRIN1Q05586 938 aa12.4□□□□□ -0.43
NECAP1-206ENST00000542095 NPY5RQ15761 445 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms