RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.81□□□□□ -1.481e-17■■■□□ 16.6
SNHG1-218ENST00000541615 CCDC28BQ9BUN5 200 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 USP26Q9BXU7 913 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 CAPS2Q9BXY5 557 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 UPF3BQ9BZI7 483 aaKnown RBP5.81□□□□□ -1.48
SNHG1-218ENST00000541615 TRIM5Q9C035 493 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 TANGO6Q9C0B7 1094 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 FAM192AQ9GZU8 254 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC68Q9H2F9 335 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 VCXQ9H320 206 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 CD248Q9HCU0 757 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 HELLSQ9NRZ9 838 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 NOP53Q9NZM5 478 aaKnown RBP5.81□□□□□ -1.48
SNHG1-218ENST00000541615 ZFATQ9P243 1243 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 CTNNAL1Q9UBT7 734 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 RAB21Q9UL25 225 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 MKL2Q9ULH7 1088 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 AMOTL2Q9Y2J4 779 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 FMN1Q68DA7 1419 aa5.81□□□□□ -1.48
SNHG1-218ENST00000541615 SAMD9Q5K651 1589 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PLB1Q6P1J6 1458 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 EIF3FO00303 357 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 ATP9BO43861 1147 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PFDN1O60925 122 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 FLOT1O75955 427 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SASH3O75995 380 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 ALOX15P16050 662 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SYT1P21579 422 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 MATR3P43243 847 aaKnown RBP eCLIP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PMS2P54278 862 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 OXCT1P55809 520 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PPP4CP60510 307 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PDE1BQ01064 536 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SLFN5Q08AF3 891 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 COX10Q12887 443 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 IKQ13123 557 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 CBX3Q13185 183 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PTK7Q13308 1070 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 WDR43Q15061 677 aaKnown RBP eCLIP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SPDYCQ5MJ68 293 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 VPS53Q5VIR6 699 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 ARMC3Q5W041 872 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 CEP128Q6ZU80 1094 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 NLRP9Q7RTR0 991 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PCGF5Q86SE9 256 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 TTC30AQ86WT1 665 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 RASSF8Q8NHQ8 419 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 CFAP61Q8NHU2 1237 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC110Q8TBZ0 833 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 DIS3LQ8TF46 1054 aaKnown RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 CHMP7Q8WUX9 453 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 IFT81Q8WYA0 676 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 KCNN1Q92952 543 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SCYL1Q96KG9 808 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 RPGRIP1Q96KN7 1286 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SNX27Q96L92 541 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 CTAGE1Q96RT6 745 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 MTRQ99707 1265 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SPOCK3Q9BQ16 436 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 FUCA2Q9BTY2 467 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SIL1Q9H173 461 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PARVBQ9HBI1 364 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PDE11AQ9HCR9 933 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SLC39A2Q9NP94 309 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 WDR35Q9P2L0 1181 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 BIN2Q9UBW5 565 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PRELID1Q9Y255 219 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 COG6Q9Y2V7 657 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 BZW2Q9Y6E2 419 aaKnown RBP5.8□□□□□ -1.48
SNHG1-218ENST00000541615 HFM1A2PYH4 1435 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 PARD3Q8TEW0 1356 aa5.8□□□□□ -1.48
SNHG1-218ENST00000541615 SH3TC1Q8TE82 1336 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 ATP10AO60312 1499 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 IQCA1LA6NCM1 817 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 TMEM247A6NEH6 219 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 LRRC10BA6NIK2 292 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 BECN2A8MW95 431 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 NBPF26B4DH59 902 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 EIF3HO15372 352 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 MYCLP1P12525 358 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 ATP4AP20648 1035 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 MAGEA10P43363 369 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 CCT5P48643 541 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 SERPINB8P50452 374 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 CCNG1P51959 295 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 ZNF131P52739 623 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 PSME1Q06323 249 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 BTG3Q14201 252 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 PABPC1LQ4VXU2 614 aaKnown RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 C4orf46Q504U0 113 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 KANK4Q5T7N3 995 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 CYB5D1Q6P9G0 228 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 Q6ZNB5 142 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC121Q6ZUS5 278 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 RSRC2Q7L4I2 434 aaKnown RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 NANOGNBQ7Z5D8 188 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 SAPCD2Q86UD0 394 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 FAM186BQ8IYM0 893 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 SYCP3Q8IZU3 236 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms