RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 CCL5P13501 91 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 SLC5A1P13866 664 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 OSBPP22059 807 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 GRK4P32298 578 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 FKBP1AP62942 108 aaKnown RBP9.71□□□□□ -0.86
LMO3-226ENST00000541589 VGLL4Q14135 290 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 NECTIN1Q15223 517 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
LMO3-226ENST00000541589 MCMDC2Q4G0Z9 681 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 C17orf99Q6UX52 265 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.86
LMO3-226ENST00000541589 VEZTQ9HBM0 779 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 HELLSQ9NRZ9 838 aa9.71□□□□□ -0.86
LMO3-226ENST00000541589 RBM8AQ9Y5S9 174 aaKnown RBP9.71□□□□□ -0.86
LMO3-226ENST00000541589 BTBD19C9JJ37 291 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
LMO3-226ENST00000541589 TAF5LO75529 589 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 FARP2O94887 1054 aaPredicted RBP9.7□□□□□ -0.86
LMO3-226ENST00000541589 ZFYP08048 801 aaPredicted RBP9.7□□□□□ -0.86
LMO3-226ENST00000541589 ZKSCAN1P17029 563 aaPredicted RBP9.7□□□□□ -0.86
LMO3-226ENST00000541589 BMP8BP34820 402 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 KCNJ4P48050 445 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 NFKBIBQ15653 356 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 ZMYM1Q5SVZ6 1142 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 RNF20Q5VTR2 975 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 C15orf52Q6ZUT6 534 aaKnown RBP9.7□□□□□ -0.86
LMO3-226ENST00000541589 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
LMO3-226ENST00000541589 DEFB123Q8N688 67 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 TRIM47Q96LD4 638 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 GDF15Q99988 308 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 TM6SF1Q9BZW5 370 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 RABGEF1Q9UJ41 708 aa9.7□□□□□ -0.86
LMO3-226ENST00000541589 VCANP13611 3396 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 SPDYE5A6NIY4 337 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 F8W031 263 aaPredicted RBP9.69□□□□□ -0.86
LMO3-226ENST00000541589 MAP3K7O43318 606 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 ARID4AP29374 1257 aaPredicted RBP9.69□□□□□ -0.86
LMO3-226ENST00000541589 TTF1Q15361 905 aaPredicted RBP9.69□□□□□ -0.86
LMO3-226ENST00000541589 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 Q7L0L9 218 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
LMO3-226ENST00000541589 U2AF1L4Q8WU68 220 aaKnown RBP9.69□□□□□ -0.86
LMO3-226ENST00000541589 ANKRD2Q9GZV1 360 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 RNF208Q9H0X6 261 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 MTMR10Q9NXD2 777 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 HMG20BQ9P0W2 317 aa9.69□□□□□ -0.86
LMO3-226ENST00000541589 ADGRA2Q96PE1 1338 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 SLC27A2O14975 620 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 WDHD1O75717 1129 aaPredicted RBP9.68□□□□□ -0.86
LMO3-226ENST00000541589 SGPL1O95470 568 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 CETPP11597 493 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 IL1R1P14778 569 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 MCAMP43121 646 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 ZAP70P43403 619 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 PSMC4P43686 418 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 CHRNDQ07001 517 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 TNFAIP1Q13829 316 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 LRIT3Q3SXY7 679 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 KCTD12Q96CX2 325 aaKnown RBP9.68□□□□□ -0.86
LMO3-226ENST00000541589 UPF3BQ9BZI7 483 aaKnown RBP9.68□□□□□ -0.86
LMO3-226ENST00000541589 ZNF70Q9UC06 446 aaPredicted RBP9.68□□□□□ -0.86
LMO3-226ENST00000541589 SNCAIPQ9Y6H5 919 aa9.68□□□□□ -0.86
LMO3-226ENST00000541589 SPTBN5Q9NRC6 3674 aaKnown RBP9.68□□□□□ -0.86
LMO3-226ENST00000541589 RPAP1Q9BWH6 1393 aaPredicted RBP9.67□□□□□ -0.86
LMO3-226ENST00000541589 SNAP23O00161 211 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 IRF6O14896 467 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 CAPN2P17655 700 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 PSMA5P28066 241 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 HOXD10P28358 340 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 PHKA1P46020 1223 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 ZSCAN25Q6NSZ9 544 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 TMX3Q96JJ7 454 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 TTC14Q96N46 770 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 SEC62Q99442 399 aaKnown RBP9.67□□□□□ -0.86
LMO3-226ENST00000541589 DSCC1Q9BVC3 393 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.67□□□□□ -0.86
LMO3-226ENST00000541589 CWC22Q9HCG8 908 aaKnown RBP9.67□□□□□ -0.86
LMO3-226ENST00000541589 CSADQ9Y600 493 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 MAST3O60307 1309 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 MYPNQ86TC9 1320 aa9.67□□□□□ -0.86
LMO3-226ENST00000541589 CASTP20810 708 aaKnown RBP9.66□□□□□ -0.86
LMO3-226ENST00000541589 UBXN2AP68543 259 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 SNAPC2Q13487 334 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 CUL4AQ13619 759 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 KRT32Q14532 448 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 VPS53Q5VIR6 699 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 CCDC129Q6ZRS4 1044 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 ERO1BQ86YB8 467 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 APPBP2Q92624 585 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 JAKMIP1Q96N16 626 aaKnown RBP9.66□□□□□ -0.86
LMO3-226ENST00000541589 TMEM39BQ9GZU3 492 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 TDRD3Q9H7E2 651 aaKnown RBP9.66□□□□□ -0.86
LMO3-226ENST00000541589 KIAA1468Q9P260 1216 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 HCSTQ9UBK5 93 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms