RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CERKLQ49MI3 558 aaPredicted RBP32.54■■■□□ 2.8
CCM2-218ENST00000541586 TMEM67Q5HYA8 995 aa32.54■■■□□ 2.8
CCM2-218ENST00000541586 ROBO3Q96MS0 1386 aa32.54■■■□□ 2.8
CCM2-218ENST00000541586 KLF18A0A0U1RQI7 1052 aa32.54■■■□□ 2.8
CCM2-218ENST00000541586 IFIT3O14879 490 aaKnown RBP32.54■■■□□ 2.8
CCM2-218ENST00000541586 GDF11O95390 407 aa32.54■■■□□ 2.8
CCM2-218ENST00000541586 RRP1BQ14684 758 aaKnown RBP32.54■■■□□ 2.8
CCM2-218ENST00000541586 MTA3Q9BTC8 594 aa32.54■■■□□ 2.8
CCM2-218ENST00000541586 LY9Q9HBG7 655 aa32.54■■■□□ 2.8
CCM2-218ENST00000541586 TMEM88BA6NKF7 163 aa32.53■■■□□ 2.8
CCM2-218ENST00000541586 DTNBO60941 627 aa32.53■■■□□ 2.8
CCM2-218ENST00000541586 MAP3K9P80192 1104 aa32.53■■■□□ 2.8
CCM2-218ENST00000541586 TATDN1Q6P1N9 297 aa32.53■■■□□ 2.8
CCM2-218ENST00000541586 ZNF287Q9HBT7 754 aa32.53■■■□□ 2.8
CCM2-218ENST00000541586 GJB2P29033 226 aa32.52■■■□□ 2.8
CCM2-218ENST00000541586 ZNF444Q8N0Y2 327 aaPredicted RBP32.52■■■□□ 2.8
CCM2-218ENST00000541586 ZKSCAN3Q9BRR0 538 aa32.52■■■□□ 2.8
CCM2-218ENST00000541586 SENP2Q9HC62 589 aa32.52■■■□□ 2.8
CCM2-218ENST00000541586 ZNF112Q9UJU3 913 aa32.52■■■□□ 2.8
CCM2-218ENST00000541586 MPHOSPH10O00566 681 aaKnown RBP32.51■■■□□ 2.8
CCM2-218ENST00000541586 RANBP6O60518 1105 aaKnown RBP32.51■■■□□ 2.8
CCM2-218ENST00000541586 LIFRP42702 1097 aa32.51■■■□□ 2.8
CCM2-218ENST00000541586 FKBP1BP68106 108 aa32.51■■■□□ 2.8
CCM2-218ENST00000541586 SART3Q15020 963 aaKnown RBP32.51■■■□□ 2.8
CCM2-218ENST00000541586 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.51■■■□□ 2.8
CCM2-218ENST00000541586 ABT1Q9ULW3 272 aaKnown RBP32.51■■■□□ 2.8
CCM2-218ENST00000541586 TRPM7Q96QT4 1865 aa32.51■■■□□ 2.8
CCM2-218ENST00000541586 CCT2P78371 535 aaKnown RBP32.51■■■□□ 2.79
CCM2-218ENST00000541586 HUNKP57058 714 aa32.5■■■□□ 2.79
CCM2-218ENST00000541586 MAP3K11Q16584 847 aa32.5■■■□□ 2.79
CCM2-218ENST00000541586 SHROOM1Q2M3G4 852 aaPredicted RBP32.5■■■□□ 2.79
CCM2-218ENST00000541586 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.5■■■□□ 2.79
CCM2-218ENST00000541586 SGMS1Q86VZ5 419 aa32.5■■■□□ 2.79
CCM2-218ENST00000541586 TNPO1Q92973 898 aaKnown RBP32.5■■■□□ 2.79
CCM2-218ENST00000541586 CSADQ9Y600 493 aa32.5■■■□□ 2.79
CCM2-218ENST00000541586 GOLGA8BA8MQT2 603 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 CTNND1O60716 968 aaKnown RBP32.49■■■□□ 2.79
CCM2-218ENST00000541586 CAP2P40123 477 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 APLP1P51693 650 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 FAM47AQ5JRC9 791 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 ANKRD13AQ8IZ07 590 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 UBAC1Q9BSL1 405 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 NCOA5Q9HCD5 579 aaKnown RBP32.49■■■□□ 2.79
CCM2-218ENST00000541586 HPS5Q9UPZ3 1129 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 ZDHHC9Q9Y397 364 aa32.49■■■□□ 2.79
CCM2-218ENST00000541586 RASA1P20936 1047 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 NFKBIBQ15653 356 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 CLMNQ96JQ2 1002 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 ERICH2A1L162 156 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 VGLL4Q14135 290 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 ABCB5Q2M3G0 1257 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 NFXL1Q6ZNB6 911 aa32.48■■■□□ 2.79
CCM2-218ENST00000541586 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.48■■■□□ 2.79
CCM2-218ENST00000541586 GH2P01242 217 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 AKR1B1P15121 316 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 JAG1P78504 1218 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 WTAPQ15007 396 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 APOA5Q6Q788 366 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 SAPCD2Q86UD0 394 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 LLPHQ9BRT6 129 aaKnown RBP32.47■■■□□ 2.79
CCM2-218ENST00000541586 CABP5Q9NP86 173 aa32.47■■■□□ 2.79
CCM2-218ENST00000541586 LDLRAD1Q5T700 205 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 ZSCAN10Q96SZ4 725 aaPredicted RBP32.46■■■□□ 2.79
CCM2-218ENST00000541586 ELP3Q9H9T3 547 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 TNKSO95271 1327 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 TFAP4Q01664 338 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 IQCA1Q86XH1 822 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 RAB11FIP4Q86YS3 637 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 SLC10A4Q96EP9 437 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 PICK1Q9NRD5 415 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 TAOK2Q9UL54 1235 aa32.46■■■□□ 2.79
CCM2-218ENST00000541586 TSPY2A6NKD2 308 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 JAK2O60674 1132 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 BRD1O95696 1058 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 TSPY3P0CV98 308 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 TSPY8P0CW00 308 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 C1QTNF8P60827 252 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 SEC23AQ15436 765 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 CHMP4CQ96CF2 233 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 CCDC17Q96LX7 622 aa32.45■■■□□ 2.78
CCM2-218ENST00000541586 PAPPA2Q9BXP8 1791 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 CCDC69A6NI79 296 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 CTDNEP1O95476 244 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 NT5C2P49902 561 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 SCYL3Q8IZE3 742 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 TMTC2Q8N394 836 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 NSUN7Q8NE18 718 aaKnown RBP32.44■■■□□ 2.78
CCM2-218ENST00000541586 TLL2Q9Y6L7 1015 aa32.44■■■□□ 2.78
CCM2-218ENST00000541586 SYT1P21579 422 aa32.43■■■□□ 2.78
CCM2-218ENST00000541586 CCDC84Q86UT8 332 aaPredicted RBP32.43■■■□□ 2.78
CCM2-218ENST00000541586 ENAHQ8N8S7 591 aaPredicted RBP32.43■■■□□ 2.78
CCM2-218ENST00000541586 SMARCC2Q8TAQ2 1214 aa32.43■■■□□ 2.78
CCM2-218ENST00000541586 NBR1Q14596 966 aa32.43■■■□□ 2.78
CCM2-218ENST00000541586 ZBTB21Q9ULJ3 1066 aa32.43■■■□□ 2.78
CCM2-218ENST00000541586 SLC12A7Q9Y666 1083 aa32.43■■■□□ 2.78
CCM2-218ENST00000541586 SNCAIPQ9Y6H5 919 aa32.43■■■□□ 2.78
CCM2-218ENST00000541586 ZBTB43O43298 467 aa32.42■■■□□ 2.78
CCM2-218ENST00000541586 ASNSP08243 561 aa32.42■■■□□ 2.78
CCM2-218ENST00000541586 HTRA3P83110 453 aa32.42■■■□□ 2.78
CCM2-218ENST00000541586 CREBZFQ9NS37 354 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms