RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-217ENST00000541578 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 GREM1O60565 184 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 HTR3BO95264 441 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 KIR3DL1P43629 444 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 LDLRAD1Q5T700 205 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 DNAJB8Q8NHS0 232 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 CYB5D2Q8WUJ1 264 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 MBNL3Q9NUK0 354 aaKnown RBP6.48□□□□□ -1.37
SNHG1-217ENST00000541578 PITPNM2Q9BZ72 1349 aa6.48□□□□□ -1.37
SNHG1-217ENST00000541578 JUNBP17275 347 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-217ENST00000541578 ZP2Q05996 745 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 MLECQ14165 292 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 SLC23A3Q6PIS1 610 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 SLFN12Q8IYM2 578 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 LMCD1Q9NZU5 365 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 ADAMTS1Q9UHI8 967 aa6.47□□□□□ -1.37
SNHG1-217ENST00000541578 CHURC1-FNTBB4DL54 471 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 RNASE1P07998 156 aaKnown RBP6.46□□□□□ -1.38
SNHG1-217ENST00000541578 ITGB5P18084 799 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 ZNF76P36508 570 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 PIWIL2Q8TC59 973 aaKnown RBP6.46□□□□□ -1.38
SNHG1-217ENST00000541578 LRRC3Q9BY71 257 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 RC3H2Q9HBD1 1191 aaKnown RBP6.46□□□□□ -1.38
SNHG1-217ENST00000541578 ATP13A1Q9HD20 1204 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 SEMA3GQ9NS98 782 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 KLHL3Q9UH77 587 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 ADAMTS6Q9UKP5 1117 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 ST14Q9Y5Y6 855 aa6.46□□□□□ -1.38
SNHG1-217ENST00000541578 LOC105371045A0A1W2PR82 267 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 H3BS24 57 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 BIN1O00499 593 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 TNNI2P48788 182 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 THAP5Q7Z6K1 395 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 PPP1R13LQ8WUF5 828 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 ASIC4Q96FT7 647 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 CCDC74BQ96LY2 380 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 ZSWIM5Q9P217 1185 aa6.45□□□□□ -1.38
SNHG1-217ENST00000541578 VAMP1P23763 118 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 CRKP46108 304 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 TNK2Q07912 1038 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 SEZ6Q53EL9 994 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 UBE2FQ969M7 185 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 PRDM7Q9NQW5 492 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 UBP1Q9NZI7 540 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 RNF114Q9Y508 228 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 PCDHB14Q9Y5E9 798 aa6.44□□□□□ -1.38
SNHG1-217ENST00000541578 ATE1O95260 518 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 TXKP42681 527 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 APOBRQ0VD83 1088 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 ATG4DQ86TL0 474 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-217ENST00000541578 PHACTR4Q8IZ21 702 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 LRRN4CLQ8ND94 238 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 BAHD1Q8TBE0 780 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-217ENST00000541578 FMNL2Q96PY5 1086 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 SPON2Q9BUD6 331 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 NT5C1AQ9BXI3 368 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 CARS2Q9HA77 564 aaKnown RBP6.43□□□□□ -1.38
SNHG1-217ENST00000541578 METTL5Q9NRN9 209 aaKnown RBP6.43□□□□□ -1.38
SNHG1-217ENST00000541578 IGSF5Q9NSI5 407 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 KCNH3Q9ULD8 1083 aa6.43□□□□□ -1.38
SNHG1-217ENST00000541578 SLC22A31A6NKX4 558 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 DNAJA2O60884 412 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 GBP1P32455 592 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 MCM4P33991 863 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 ZNF165P49910 485 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 CHMP4BP1P59074 171 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
SNHG1-217ENST00000541578 FANCCQ00597 558 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 KIAA0825Q8IV33 1275 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 REXO1Q8N1G1 1221 aaKnown RBP6.42□□□□□ -1.38
SNHG1-217ENST00000541578 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 NKD1Q969G9 470 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 RNF34Q969K3 372 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 Q96M66 194 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 KIF2CQ99661 725 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 GMIPQ9P107 970 aa6.42□□□□□ -1.38
SNHG1-217ENST00000541578 RGS13O14921 159 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 PAPLNO95428 1278 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 ARSHQ5FYA8 562 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 TMPRSS7Q7RTY8 843 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 KREMEN1Q96MU8 473 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 DUSP15Q9H1R2 295 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-217ENST00000541578 TRIT1Q9H3H1 467 aaKnown RBP6.41□□□□□ -1.38
SNHG1-217ENST00000541578 GPATCH2Q9NW75 528 aa6.41□□□□□ -1.38
SNHG1-217ENST00000541578 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.38
SNHG1-217ENST00000541578 HMGB1P09429 215 aaKnown RBP6.4□□□□□ -1.38
SNHG1-217ENST00000541578 RAG1P15918 1043 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 ERCC5P28715 1186 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-217ENST00000541578 CLCQ05315 142 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 DTWD2Q8NBA8 298 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms