RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 GADL1Q6ZQY3 521 aa25.54■■□□□ 1.68
LINC00943-207ENST00000541359 CLEC10AQ8IUN9 316 aa25.54■■□□□ 1.68
LINC00943-207ENST00000541359 SIAH1Q8IUQ4 282 aa25.54■■□□□ 1.68
LINC00943-207ENST00000541359 PROCA1Q8NCQ7 364 aaPredicted RBP25.54■■□□□ 1.68
LINC00943-207ENST00000541359 NBPF3Q9H094 633 aa25.54■■□□□ 1.68
LINC00943-207ENST00000541359 ADGRA2Q96PE1 1338 aa25.54■■□□□ 1.68
LINC00943-207ENST00000541359 CASP8AP2Q9UKL3 1982 aa25.53■■□□□ 1.68
LINC00943-207ENST00000541359 USP17L10C9JJH3 530 aa25.53■■□□□ 1.68
LINC00943-207ENST00000541359 PDHXO00330 501 aa25.53■■□□□ 1.68
LINC00943-207ENST00000541359 PRDM1O75626 825 aa25.53■■□□□ 1.68
LINC00943-207ENST00000541359 TAF1CQ15572 869 aaPredicted RBP25.53■■□□□ 1.68
LINC00943-207ENST00000541359 DSCC1Q9BVC3 393 aa25.53■■□□□ 1.68
LINC00943-207ENST00000541359 AGTPBP1Q9UPW5 1226 aa25.53■■□□□ 1.68
LINC00943-207ENST00000541359 A0A1W2PRG0 241 aa25.52■■□□□ 1.68
LINC00943-207ENST00000541359 SGSM2O43147 1006 aa25.52■■□□□ 1.68
LINC00943-207ENST00000541359 FGRP09769 529 aa25.52■■□□□ 1.68
LINC00943-207ENST00000541359 INCENPQ9NQS7 918 aa25.52■■□□□ 1.68
LINC00943-207ENST00000541359 EMILIN3Q9NT22 766 aa25.52■■□□□ 1.68
LINC00943-207ENST00000541359 SLC45A1Q9Y2W3 748 aa25.52■■□□□ 1.68
LINC00943-207ENST00000541359 C19orf81C9J6K1 198 aa25.51■■□□□ 1.67
LINC00943-207ENST00000541359 GPR25O00155 361 aa25.51■■□□□ 1.67
LINC00943-207ENST00000541359 C12orf42Q96LP6 360 aa25.51■■□□□ 1.67
LINC00943-207ENST00000541359 KIAA1683Q9H0B3 1180 aa25.51■■□□□ 1.67
LINC00943-207ENST00000541359 MKNK2Q9HBH9 465 aa25.51■■□□□ 1.67
LINC00943-207ENST00000541359 PLIN4Q96Q06 1357 aa25.51■■□□□ 1.67
LINC00943-207ENST00000541359 IGKV6D-41A0A0C4DH26 115 aa25.5■■□□□ 1.67
LINC00943-207ENST00000541359 RUFY2Q8WXA3 655 aa25.5■■□□□ 1.67
LINC00943-207ENST00000541359 SLC3A2P08195 630 aaKnown RBP25.49■■□□□ 1.67
LINC00943-207ENST00000541359 ICA1Q05084 483 aa25.49■■□□□ 1.67
LINC00943-207ENST00000541359 PDE4BQ07343 736 aa25.49■■□□□ 1.67
LINC00943-207ENST00000541359 ZNF296Q8WUU4 475 aaPredicted RBP25.49■■□□□ 1.67
LINC00943-207ENST00000541359 ZNF287Q9HBT7 754 aa25.49■■□□□ 1.67
LINC00943-207ENST00000541359 ZFYVE28Q9HCC9 887 aa25.49■■□□□ 1.67
LINC00943-207ENST00000541359 TLR2O60603 784 aa25.48■■□□□ 1.67
LINC00943-207ENST00000541359 HAND2P61296 217 aa25.48■■□□□ 1.67
LINC00943-207ENST00000541359 PTH1RQ03431 593 aa25.48■■□□□ 1.67
LINC00943-207ENST00000541359 COL13A1Q5TAT6 717 aaPredicted RBP25.48■■□□□ 1.67
LINC00943-207ENST00000541359 USP17L2Q6R6M4 530 aa25.48■■□□□ 1.67
LINC00943-207ENST00000541359 TBC1D10CQ8IV04 446 aa25.48■■□□□ 1.67
LINC00943-207ENST00000541359 ORC4O43929 436 aa25.47■■□□□ 1.67
LINC00943-207ENST00000541359 CYP2C8P10632 490 aa25.47■■□□□ 1.67
LINC00943-207ENST00000541359 ZYXQ15942 572 aaKnown RBP25.47■■□□□ 1.67
LINC00943-207ENST00000541359 NKX2-3Q8TAU0 364 aa25.47■■□□□ 1.67
LINC00943-207ENST00000541359 FEZ1Q99689 392 aa25.47■■□□□ 1.67
LINC00943-207ENST00000541359 KANSL2Q9H9L4 492 aa25.47■■□□□ 1.67
LINC00943-207ENST00000541359 EEF2P13639 858 aaKnown RBP25.46■■□□□ 1.67
LINC00943-207ENST00000541359 FAM47AQ5JRC9 791 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 KIAA1755Q5JYT7 1200 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 ZNF444Q8N0Y2 327 aaPredicted RBP25.46■■□□□ 1.67
LINC00943-207ENST00000541359 NEDD1Q8NHV4 660 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 STAG1Q8WVM7 1258 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 PARK7Q99497 189 aaKnown RBP25.46■■□□□ 1.67
LINC00943-207ENST00000541359 ESYT1Q9BSJ8 1104 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 TMOD4Q9NZQ9 345 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 TMX2Q9Y320 296 aa25.46■■□□□ 1.67
LINC00943-207ENST00000541359 HOXA7P31268 230 aaPredicted RBP25.45■■□□□ 1.66
LINC00943-207ENST00000541359 USP14P54578 494 aa25.45■■□□□ 1.66
LINC00943-207ENST00000541359 CAP1Q01518 475 aa25.45■■□□□ 1.66
LINC00943-207ENST00000541359 C17orf99Q6UX52 265 aa25.45■■□□□ 1.66
LINC00943-207ENST00000541359 VCAM1P19320 739 aa25.44■■□□□ 1.66
LINC00943-207ENST00000541359 TFAP4Q01664 338 aa25.44■■□□□ 1.66
LINC00943-207ENST00000541359 CEP95Q96GE4 821 aa25.44■■□□□ 1.66
LINC00943-207ENST00000541359 ASCC2Q9H1I8 757 aaPredicted RBP25.44■■□□□ 1.66
LINC00943-207ENST00000541359 ARHGEF10LQ9HCE6 1279 aa25.44■■□□□ 1.66
LINC00943-207ENST00000541359 MYH4Q9Y623 1939 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 NEDD4P46934 1319 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 ZSWIM8A7E2V4 1837 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 FKTNO75072 461 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 AKNAD1Q5T1N1 836 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 MTMR4Q9NYA4 1195 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 NYAP2Q9P242 653 aa25.43■■□□□ 1.66
LINC00943-207ENST00000541359 ZNF213O14771 459 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 CDC45O75419 566 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 BCRP11274 1271 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 LSG1Q9H089 658 aaKnown RBP25.42■■□□□ 1.66
LINC00943-207ENST00000541359 VCPKMTQ9H867 229 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 IL17RBQ9NRM6 502 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 CPA4Q9UI42 421 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 CTNNA3Q9UI47 895 aa25.42■■□□□ 1.66
LINC00943-207ENST00000541359 RLFQ13129 1914 aa25.41■■□□□ 1.66
LINC00943-207ENST00000541359 TSPY3P0CV98 308 aa25.41■■□□□ 1.66
LINC00943-207ENST00000541359 TSPY8P0CW00 308 aa25.41■■□□□ 1.66
LINC00943-207ENST00000541359 PCP11498 1178 aaKnown RBP25.41■■□□□ 1.66
LINC00943-207ENST00000541359 PABPC4Q13310 644 aaKnown RBP eCLIP25.41■■□□□ 1.66
LINC00943-207ENST00000541359 MAP4K1Q92918 833 aa25.41■■□□□ 1.66
LINC00943-207ENST00000541359 PNMA3Q9UL41 463 aa25.41■■□□□ 1.66
LINC00943-207ENST00000541359 PARP14Q460N5 1801 aa25.4■■□□□ 1.66
LINC00943-207ENST00000541359 NOVP48745 357 aa25.4■■□□□ 1.66
LINC00943-207ENST00000541359 SP3Q02447 781 aa25.4■■□□□ 1.66
LINC00943-207ENST00000541359 IMMTQ16891 758 aaKnown RBP25.4■■□□□ 1.66
LINC00943-207ENST00000541359 POTEEQ6S8J3 1075 aa25.4■■□□□ 1.66
LINC00943-207ENST00000541359 MKL1Q969V6 931 aa25.4■■□□□ 1.66
LINC00943-207ENST00000541359 SH2D4AQ9H788 454 aa25.4■■□□□ 1.66
LINC00943-207ENST00000541359 TSPY2A6NKD2 308 aa25.39■■□□□ 1.66
LINC00943-207ENST00000541359 RANBP6O60518 1105 aaKnown RBP25.39■■□□□ 1.66
LINC00943-207ENST00000541359 NMT2O60551 498 aa25.39■■□□□ 1.66
LINC00943-207ENST00000541359 OSBPP22059 807 aa25.39■■□□□ 1.66
LINC00943-207ENST00000541359 ATP2B2Q01814 1243 aa25.39■■□□□ 1.66
LINC00943-207ENST00000541359 MFSD6Q6ZSS7 791 aa25.39■■□□□ 1.66
LINC00943-207ENST00000541359 LPAR1Q92633 364 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms