RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SEPT2Q15019 361 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 RAB3GAP1Q15042 981 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 FBXO46Q6PJ61 603 aaPredicted RBP15.67■□□□□ 0.1
LTBR-208ENST00000541005 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 ZMYM6O95789 1325 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 APPP05067 770 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 AKR1B1P15121 316 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 SDSP20132 328 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 USP14P54578 494 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 MCMDC2Q4G0Z9 681 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 FAM227BQ96M60 508 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 CPA4Q9UI42 421 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 PLXNB2O15031 1838 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 COL11A1P12107 1806 aaPredicted RBP15.66■□□□□ 0.1
LTBR-208ENST00000541005 HTTP42858 3142 aa15.66■□□□□ 0.1
LTBR-208ENST00000541005 MINDY4BA8MYZ0 360 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 GNRH1P01148 92 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 GCLCP48506 637 aaPredicted RBP15.65■□□□□ 0.1
LTBR-208ENST00000541005 NMIQ13287 307 aaPredicted RBP15.65■□□□□ 0.1
LTBR-208ENST00000541005 ARHGEF6Q15052 776 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 ALX1Q15699 326 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 TTC22Q5TAA0 569 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 ACER1Q8TDN7 264 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 SMCR8Q8TEV9 937 aaPredicted RBP15.65■□□□□ 0.1
LTBR-208ENST00000541005 RILPL2Q969X0 211 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 FEZ1Q99689 392 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 NAPBQ9H115 298 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
LTBR-208ENST00000541005 EFCC1Q9HA90 598 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 TRIM17Q9Y577 477 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 CCDC171Q6TFL3 1326 aa15.65■□□□□ 0.1
LTBR-208ENST00000541005 PLIN4Q96Q06 1357 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 HIP1O00291 1037 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 MPHOSPH10O00566 681 aaKnown RBP15.64■□□□□ 0.09
LTBR-208ENST00000541005 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
LTBR-208ENST00000541005 RASA1P20936 1047 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 OSBPP22059 807 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 KIF22Q14807 665 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 FAM110CQ1W6H9 321 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
LTBR-208ENST00000541005 A0A1W2PRG0 241 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 VCAM1P19320 739 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 CTGFP29279 349 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 IRX3P78415 501 aaPredicted RBP15.63■□□□□ 0.09
LTBR-208ENST00000541005 ICA1Q05084 483 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 PPARAQ07869 468 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 VPS53Q5VIR6 699 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 CENPQQ7L2Z9 268 aaPredicted RBP15.63■□□□□ 0.09
LTBR-208ENST00000541005 ZNF589Q86UQ0 364 aaPredicted RBP15.63■□□□□ 0.09
LTBR-208ENST00000541005 SIAH1Q8IUQ4 282 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 GTF3C2Q8WUA4 911 aaPredicted RBP15.63■□□□□ 0.09
LTBR-208ENST00000541005 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.63■□□□□ 0.09
LTBR-208ENST00000541005 ARHGAP39Q9C0H5 1083 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 KANSL2Q9H9L4 492 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 HPS5Q9UPZ3 1129 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 PTPN22Q9Y2R2 807 aa15.63■□□□□ 0.09
LTBR-208ENST00000541005 SLC3A2P08195 630 aaKnown RBP15.62■□□□□ 0.09
LTBR-208ENST00000541005 MFAP1P55081 439 aaKnown RBP15.62■□□□□ 0.09
LTBR-208ENST00000541005 PRMT2P55345 433 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 LPAR1Q92633 364 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 TRIM47Q96LD4 638 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 ARHGEF10LQ9HCE6 1279 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 DIAPH3Q9NSV4 1193 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 MORF4L1Q9UBU8 362 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 ANAPC4Q9UJX5 808 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
LTBR-208ENST00000541005 HSPD1P10809 573 aaKnown RBP15.61■□□□□ 0.09
LTBR-208ENST00000541005 FCGRTP55899 365 aa15.61■□□□□ 0.09
LTBR-208ENST00000541005 HERVK_113P62684 666 aa15.61■□□□□ 0.09
LTBR-208ENST00000541005 PDE4BQ07343 736 aa15.61■□□□□ 0.09
LTBR-208ENST00000541005 CLEC10AQ8IUN9 316 aa15.61■□□□□ 0.09
LTBR-208ENST00000541005 MKNK2Q9HBH9 465 aa15.61■□□□□ 0.09
LTBR-208ENST00000541005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
LTBR-208ENST00000541005 ZNFX1Q9P2E3 1918 aaKnown RBP15.6■□□□□ 0.09
LTBR-208ENST00000541005 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L15C9J2P7 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L13C9JLJ4 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L11C9JVI0 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L18D6R9N7 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L22D6RA61 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L17D6RBQ6 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L19D6RCP7 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L20D6RJB6 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 FGRP09769 529 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 PSMC4P43686 418 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 USP17L24Q0WX57 530 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 ZYXQ15942 572 aaKnown RBP15.6■□□□□ 0.09
LTBR-208ENST00000541005 LBX2Q6XYB7 198 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 CATSPERGQ6ZRH7 1159 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 ANKRD13CQ8N6S4 541 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 P2RX7Q99572 595 aaKnown RBP15.6■□□□□ 0.09
LTBR-208ENST00000541005 VCPKMTQ9H867 229 aa15.6■□□□□ 0.09
LTBR-208ENST00000541005 ZNF236Q9UL36 1845 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 FGAP02671 866 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 EEF2P13639 858 aaKnown RBP15.59■□□□□ 0.09
LTBR-208ENST00000541005 CWC27Q6UX04 472 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms