RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 VIL1P09327 827 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 BTDP43251 543 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 USP5P45974 858 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 ANAPC15P60006 121 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 FKBP1AP62942 108 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 NECTIN1Q15223 517 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 RSBN1LQ6PCB5 846 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 IFNL3Q8IZI9 196 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 ZNF384Q8TF68 577 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 RIOK1Q9BRS2 568 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 HDAC9Q9UKV0 1011 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 PALD1Q9ULE6 856 aa7.89□□□□□ -1.15
CLTCL1-206ENST00000540896 SCN9AQ15858 1988 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 AK9Q5TCS8 1911 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 AKAP11Q9UKA4 1901 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 GPR75-ASB3A0A0A6YYF3 556 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 GSG1L2A8MUP6 293 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 USP17L8P0C7I0 530 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 PSMA5P28066 241 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 CRKP46108 304 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 GMPSP49915 693 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 HAND2P61296 217 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 HDLBPQ00341 1268 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 BECN1Q14457 450 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 KRT32Q14532 448 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 RABEP1Q15276 862 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 ALX1Q15699 326 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 HHIPL2Q6UWX4 724 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 TREML4Q6UXN2 200 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 AMOTL1Q8IY63 956 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 TEX11Q8IYF3 940 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 AGBL3Q8NEM8 1001 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 SH3RF3Q8TEJ3 882 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 TGFBRAP1Q8WUH2 860 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 SDR42E1Q8WUS8 393 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 MRGPRX2Q96LB1 330 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 USP40Q9NVE5 1235 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 DAGLAQ9Y4D2 1042 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
CLTCL1-206ENST00000540896 RPAP1Q9BWH6 1393 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 POLR3DP05423 398 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 SMPD1P17405 629 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 RPS12P25398 132 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 NEK4P51957 841 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 TRDNQ13061 729 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 GIMAP6Q6P9H5 292 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 DPF2Q92785 391 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 GMLQ99445 158 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 MRIQ9BWK5 157 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 RRAGCQ9HB90 399 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 GPBP1L1Q9HC44 474 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 SENP2Q9HC62 589 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 TOMM22Q9NS69 142 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 ATP8A2Q9NTI2 1148 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 MCM9Q9NXL9 1143 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 GPRC5DQ9NZD1 345 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 CNOT7Q9UIV1 285 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 CYP46A1Q9Y6A2 500 aa7.87□□□□□ -1.15
CLTCL1-206ENST00000540896 GAKO14976 1311 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 USP17L21D6R901 530 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 H7C1D1 291 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 SLC3A2P08195 630 aaKnown RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 CYP21A2P08686 494 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 FDX1P10109 184 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 VEGFAP15692 232 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 CASTP20810 708 aaKnown RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 EPS15P42566 896 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 FGD1P98174 961 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 DLGAP5Q15398 846 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 CFAP100Q494V2 611 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 BLOC1S2Q6QNY1 142 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 RALYLQ86SE5 291 aaKnown RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 MAPKAPK5Q8IW41 473 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 HSCBQ8IWL3 235 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 STK11IPQ8N1F8 1099 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 ZDHHC15Q96MV8 337 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 NEK1Q96PY6 1258 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 KIF2CQ99661 725 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 EPB41L4AQ9HCS5 686 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 NMRK2Q9NPI5 230 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 TMOD2Q9NZR1 351 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 HACL1Q9UJ83 578 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 PSME4Q14997 1843 aa7.86□□□□□ -1.15
CLTCL1-206ENST00000540896 ZMYM6O95789 1325 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 SHTN1A0MZ66 631 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 IQCA1LA6NCM1 817 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 SPDYE5A6NIY4 337 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 E7EWF7 191 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 FOXP2O15409 715 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 MYO1BO43795 1136 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 HMGB1P09429 215 aaKnown RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 CPA1P15085 419 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms