RNA–Protein interactions for RNA: ENST00000540688.1

NDUFA9-206, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2 BASIC

Gene NDUFA9, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-206ENST00000540688 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.32
NDUFA9-206ENST00000540688 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
NDUFA9-206ENST00000540688 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
NDUFA9-206ENST00000540688 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
NDUFA9-206ENST00000540688 MGAMO43451 1857 aa13.05□□□□□ -0.32
NDUFA9-206ENST00000540688 PTPRFP10586 1907 aa13.05□□□□□ -0.32
NDUFA9-206ENST00000540688 ATP5JP18859 108 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 RGS2P41220 211 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 PLCD1P51178 756 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 SHROOM1Q2M3G4 852 aaPredicted RBP13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 SDR42E1Q8WUS8 393 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 RIOK1Q9BRS2 568 aaKnown RBP13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 KIAA1683Q9H0B3 1180 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 ARHGEF10LQ9HCE6 1279 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
NDUFA9-206ENST00000540688 CEP290O15078 2479 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 MBD4O95243 580 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 SEPT2Q15019 361 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 EDC3Q96F86 508 aaKnown RBP13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 HAUS7Q99871 368 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 RPAP3Q9H6T3 665 aaPredicted RBP13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 RBPJLQ9UBG7 517 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 MYH1P12882 1939 aa13.03□□□□□ -0.32
NDUFA9-206ENST00000540688 LOC285556D6RIA3 1793 aa13.02□□□□□ -0.32
NDUFA9-206ENST00000540688 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.32
NDUFA9-206ENST00000540688 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 VCAM1P19320 739 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 SHMT1P34896 483 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 ADD2P35612 726 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 LRRFIP1Q32MZ4 808 aaKnown RBP13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 MFSD14CQ5VZR4 134 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 TMEM179Q6ZVK1 233 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 GPR142Q7Z601 462 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 ACER1Q8TDN7 264 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 PAK6Q9NQU5 681 aaPredicted RBP13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 GJD2Q9UKL4 321 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 SLC4A4Q9Y6R1 1079 aa13.02□□□□□ -0.33
NDUFA9-206ENST00000540688 RAD21O60216 631 aa13.01□□□□□ -0.33
NDUFA9-206ENST00000540688 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
NDUFA9-206ENST00000540688 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
NDUFA9-206ENST00000540688 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
NDUFA9-206ENST00000540688 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
NDUFA9-206ENST00000540688 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
NDUFA9-206ENST00000540688 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 SMARCA5O60264 1052 aaPredicted RBP13□□□□□ -0.33
NDUFA9-206ENST00000540688 PEX10O60683 326 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 PLS1Q14651 629 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 COG2Q14746 738 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 UBE3CQ15386 1083 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 Q3C1V9 767 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 TRIB2Q92519 343 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 APBA2Q99767 749 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 PORCNQ9H237 461 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 ECHDC1Q9NTX5 307 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
NDUFA9-206ENST00000540688 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 SLC15A5A6NIM6 579 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 USP17L12C9JPN9 530 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 USP17L21D6R901 530 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 PRKAB2O43741 272 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 CYP2D6P10635 497 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 CNGA1P29973 690 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 ICA1Q05084 483 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 GABPAQ06546 454 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 C20orf194Q5TEA3 1177 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 DPP9Q86TI2 863 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 LPAR1Q92633 364 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 DYNLL2Q96FJ2 89 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 SIPA1L1O43166 1804 aa12.99□□□□□ -0.33
NDUFA9-206ENST00000540688 FLOT1O75955 427 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 APPP05067 770 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 CDK8P49336 464 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 TRIM32Q13049 653 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 MORN1Q5T089 497 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
NDUFA9-206ENST00000540688 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms