RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MTF1Q14872 753 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 GOLGA1Q92805 767 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 ERICH4A6NGS2 130 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 XBP1P17861 261 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 PBX1P40424 430 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 RBL2Q08999 1139 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 CUL4BQ13620 913 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 KARSQ15046 597 aaKnown RBP13.99□□□□□ -0.17
NPC1-202ENST00000540608 PPFIBP1Q86W92 1011 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
NPC1-202ENST00000540608 PAGE5Q96GU1 130 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 UBAC1Q9BSL1 405 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 ARFGAP3Q9NP61 516 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 ADGRG1Q9Y653 693 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 A0A087X0B3 334 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 SOWAHDA6NJG2 315 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 SEMA3EO15041 775 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
NPC1-202ENST00000540608 PPARAQ07869 468 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 SEC23AQ15436 765 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 CDKAL1Q5VV42 579 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 JAKMIP3Q5VZ66 844 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 IGSF22Q8N9C0 903 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 CTAGE1Q96RT6 745 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 CALCOCO1Q9P1Z2 691 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
NPC1-202ENST00000540608 BCORQ6W2J9 1755 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
NPC1-202ENST00000540608 TXLNAP40222 546 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 AKAP17AQ02040 695 aaKnown RBP13.98□□□□□ -0.17
NPC1-202ENST00000540608 RAD9BQ6WBX8 426 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 SHISA4Q96DD7 197 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 EPSTI1Q96J88 318 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 GSDMAQ96QA5 445 aa13.98□□□□□ -0.17
NPC1-202ENST00000540608 KRT2P35908 639 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 AFMP43652 599 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
NPC1-202ENST00000540608 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 PHF20Q9BVI0 1012 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 SYNRGQ9UMZ2 1314 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
NPC1-202ENST00000540608 BMP15O95972 392 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 BCAMP50895 628 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 DPYDQ12882 1025 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 PKN1Q16512 942 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 ESR2Q92731 530 aa13.97□□□□□ -0.17
NPC1-202ENST00000540608 IRX2Q9BZI1 471 aaPredicted RBP13.97□□□□□ -0.17
NPC1-202ENST00000540608 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
NPC1-202ENST00000540608 DOT1LQ8TEK3 1739 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 PRPF3O43395 683 aaKnown RBP13.96□□□□□ -0.17
NPC1-202ENST00000540608 SMC1AQ14683 1233 aaKnown RBP13.96□□□□□ -0.17
NPC1-202ENST00000540608 FILIP1LQ4L180 1135 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 KLHL10Q6JEL2 608 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 SYMPKQ92797 1274 aaKnown RBP13.96□□□□□ -0.17
NPC1-202ENST00000540608 FUT8Q9BYC5 575 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
NPC1-202ENST00000540608 A0A0G2JS52 829 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 KIF5CO60282 957 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 STX17P56962 302 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 TUBB2AQ13885 445 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 BRD3Q15059 726 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
NPC1-202ENST00000540608 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 CCDC51Q96ER9 411 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 TUBB2BQ9BVA1 445 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 LZTFL1Q9NQ48 299 aa13.96□□□□□ -0.17
NPC1-202ENST00000540608 TNKSO95271 1327 aa13.96□□□□□ -0.18
NPC1-202ENST00000540608 PLCH1Q4KWH8 1693 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 CCDC151A5D8V7 595 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 FUT2Q10981 343 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 TOM1O60784 492 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 MFAP3LO75121 409 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 OAS2P29728 719 aaKnown RBP13.95□□□□□ -0.18
NPC1-202ENST00000540608 CRKLP46109 303 aaKnown RBP13.95□□□□□ -0.18
NPC1-202ENST00000540608 CHMP4BP1P59074 171 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 CDC23Q9UJX2 597 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 ITIH6Q6UXX5 1313 aa13.95□□□□□ -0.18
NPC1-202ENST00000540608 CYP7A1P22680 504 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 FECHP22830 423 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 CASP1P29466 404 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 TUBB4BP68371 445 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 CEP112Q8N8E3 955 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 MYH6P13533 1939 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 ACSBG1Q96GR2 724 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
NPC1-202ENST00000540608 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
NPC1-202ENST00000540608 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
NPC1-202ENST00000540608 COL16A1Q07092 1604 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms