RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
INO80E-203ENST00000540562 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.16
INO80E-203ENST00000540562 HOOK1Q9UJC3 728 aaKnown RBP16.08■□□□□ 0.16
INO80E-203ENST00000540562 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.16
INO80E-203ENST00000540562 CASP14P31944 242 aa16.08■□□□□ 0.16
INO80E-203ENST00000540562 RRAGBQ5VZM2 374 aa16.08■□□□□ 0.16
INO80E-203ENST00000540562 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
INO80E-203ENST00000540562 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
INO80E-203ENST00000540562 KRT2P35908 639 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 PKN1Q16512 942 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 TXNRD3Q86VQ6 643 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 SLC44A5Q8NCS7 719 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
INO80E-203ENST00000540562 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
INO80E-203ENST00000540562 GDAQ9Y2T3 454 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 PARP3Q9Y6F1 533 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 TAF1P21675 1872 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 SYNRGQ9UMZ2 1314 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 TRIM49BA6NDI0 452 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 TSPY2A6NKD2 308 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
INO80E-203ENST00000540562 TMEM139Q8IV31 216 aa16.07■□□□□ 0.16
INO80E-203ENST00000540562 CUL4BQ13620 913 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 PPFIBP1Q86W92 1011 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 PAGE5Q96GU1 130 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 RAD9BQ6WBX8 426 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 SRBD1Q8N5C6 995 aaKnown RBP16.06■□□□□ 0.16
INO80E-203ENST00000540562 VAT1LQ9HCJ6 419 aa16.06■□□□□ 0.16
INO80E-203ENST00000540562 SAP30BPQ9UHR5 308 aaKnown RBP16.06■□□□□ 0.16
INO80E-203ENST00000540562 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 SKIDA1Q1XH10 827 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 TMCO3Q6UWJ1 677 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 MCM9Q9NXL9 1143 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 SLIT2O94813 1529 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
INO80E-203ENST00000540562 ARHGAP6O43182 974 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 RHOXF2BP0C7M4 288 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 MORC3Q14149 939 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 RHOXF2Q9BQY4 288 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 FOXP1Q9H334 677 aaPredicted RBP16.05■□□□□ 0.16
INO80E-203ENST00000540562 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
INO80E-203ENST00000540562 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
INO80E-203ENST00000540562 BCL9O00512 1426 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 N4BP3O15049 544 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 PPP2R3AQ06190 1150 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 KLHL34Q8N239 644 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 TRIM10Q9UDY6 481 aa16.05■□□□□ 0.16
INO80E-203ENST00000540562 TOGARAM1Q9Y4F4 1720 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 WDR19Q8NEZ3 1342 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 ZSCAN12O43309 604 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 NTSR2O95665 410 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 SLFN14P0C7P3 912 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 PNMA6AP0CW24 399 aaPredicted RBP16.04■□□□□ 0.16
INO80E-203ENST00000540562 XBP1P17861 261 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
INO80E-203ENST00000540562 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 GDAP1L1Q96MZ0 367 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 NUP88Q99567 741 aaPredicted RBP16.04■□□□□ 0.16
INO80E-203ENST00000540562 MORC2Q9Y6X9 1032 aaPredicted RBP16.04■□□□□ 0.16
INO80E-203ENST00000540562 MYH2Q9UKX2 1941 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 COL4A1P02462 1669 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 USP17L3A6NCW0 530 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 USP17L4A6NCW7 530 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 KIF2AO00139 706 aaPredicted RBP16.04■□□□□ 0.16
INO80E-203ENST00000540562 USP17L1Q7RTZ2 530 aa16.04■□□□□ 0.16
INO80E-203ENST00000540562 MARCH10Q8NA82 808 aaPredicted RBP16.04■□□□□ 0.16
INO80E-203ENST00000540562 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
INO80E-203ENST00000540562 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 MECOMQ03112 1051 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 SEC23AQ15436 765 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 CCDC93Q567U6 631 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 NEK11Q8NG66 645 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
INO80E-203ENST00000540562 BAZ2AQ9UIF9 1905 aaKnown RBP16.03■□□□□ 0.16
INO80E-203ENST00000540562 MCM6Q14566 821 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 FAM84BQ96KN1 310 aaPredicted RBP16.03■□□□□ 0.16
INO80E-203ENST00000540562 SLF1Q9BQI6 1058 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 FHOD1Q9Y613 1164 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 FAM170AA1A519 330 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 AKR1B15C9JRZ8 316 aaPredicted RBP16.03■□□□□ 0.16
INO80E-203ENST00000540562 ENC1O14682 589 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 PLCD1P51178 756 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 TERF2Q15554 542 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 ALX1Q15699 326 aa16.03■□□□□ 0.16
INO80E-203ENST00000540562 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms