RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 USP17L19D6RCP7 530 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 USP17L20D6RJB6 530 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
PSMD3-204ENST00000540504 XRCC5P13010 732 aaKnown RBP20.21■□□□□ 0.83
PSMD3-204ENST00000540504 USP17L24Q0WX57 530 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 HAUS7Q99871 368 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 LRRCC1Q9C099 1032 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 CRISPLD2Q9H0B8 497 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.21■□□□□ 0.83
PSMD3-204ENST00000540504 BOLA2Q9H3K6 86 aa20.21■□□□□ 0.83
PSMD3-204ENST00000540504 H0YGN5 161 aa20.2■□□□□ 0.82
PSMD3-204ENST00000540504 ADD2P35612 726 aa20.2■□□□□ 0.82
PSMD3-204ENST00000540504 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
PSMD3-204ENST00000540504 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
PSMD3-204ENST00000540504 LCORLQ8N3X6 602 aa20.2■□□□□ 0.82
PSMD3-204ENST00000540504 HMX1Q9NP08 348 aaPredicted RBP20.2■□□□□ 0.82
PSMD3-204ENST00000540504 DCP1AQ9NPI6 582 aaPredicted RBP20.2■□□□□ 0.82
PSMD3-204ENST00000540504 RABGAP1Q9Y3P9 1069 aa20.2■□□□□ 0.82
PSMD3-204ENST00000540504 RPTORQ8N122 1335 aa20.2■□□□□ 0.82
PSMD3-204ENST00000540504 ZYXQ15942 572 aaKnown RBP20.19■□□□□ 0.82
PSMD3-204ENST00000540504 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
PSMD3-204ENST00000540504 SDR42E1Q8WUS8 393 aa20.19■□□□□ 0.82
PSMD3-204ENST00000540504 EDC3Q96F86 508 aaKnown RBP20.19■□□□□ 0.82
PSMD3-204ENST00000540504 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
PSMD3-204ENST00000540504 ATP8A2Q9NTI2 1148 aa20.19■□□□□ 0.82
PSMD3-204ENST00000540504 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
PSMD3-204ENST00000540504 VCAM1P19320 739 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 GUCY1A2P33402 732 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 CCNA1P78396 465 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 UBE3CQ15386 1083 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 Q3C1V9 767 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 C20orf194Q5TEA3 1177 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 LBX2Q6XYB7 198 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 ANKLE1Q8NAG6 615 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 ACER1Q8TDN7 264 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 PAGR1Q9BTK6 254 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 COLQQ9Y215 455 aaPredicted RBP20.18■□□□□ 0.82
PSMD3-204ENST00000540504 NR2E3Q9Y5X4 410 aa20.18■□□□□ 0.82
PSMD3-204ENST00000540504 MYH7P12883 1935 aa20.17■□□□□ 0.82
PSMD3-204ENST00000540504 CYP2B6P20813 491 aa20.17■□□□□ 0.82
PSMD3-204ENST00000540504 GPR142Q7Z601 462 aa20.17■□□□□ 0.82
PSMD3-204ENST00000540504 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
PSMD3-204ENST00000540504 TRIB2Q92519 343 aa20.17■□□□□ 0.82
PSMD3-204ENST00000540504 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
PSMD3-204ENST00000540504 PEX10O60683 326 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 GLRX3O76003 335 aaKnown RBP20.16■□□□□ 0.82
PSMD3-204ENST00000540504 RGS2P41220 211 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 SEPT2Q15019 361 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 TMEM179Q6ZVK1 233 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 AMOTL1Q8IY63 956 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 USP6NLQ92738 828 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 DDRGK1Q96HY6 314 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 PORCNQ9H237 461 aa20.16■□□□□ 0.82
PSMD3-204ENST00000540504 MYH8P13535 1937 aa20.15■□□□□ 0.82
PSMD3-204ENST00000540504 MPHOSPH10O00566 681 aaKnown RBP20.15■□□□□ 0.82
PSMD3-204ENST00000540504 MBD4O95243 580 aa20.15■□□□□ 0.82
PSMD3-204ENST00000540504 MORN1Q5T089 497 aa20.15■□□□□ 0.82
PSMD3-204ENST00000540504 MAP3K21Q5TCX8 1036 aa20.15■□□□□ 0.82
PSMD3-204ENST00000540504 NECAB2Q7Z6G3 386 aa20.15■□□□□ 0.82
PSMD3-204ENST00000540504 CWC22Q9HCG8 908 aaKnown RBP20.15■□□□□ 0.82
PSMD3-204ENST00000540504 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
PSMD3-204ENST00000540504 TRIM32Q13049 653 aa20.14■□□□□ 0.81
PSMD3-204ENST00000540504 CCDC17Q96LX7 622 aa20.14■□□□□ 0.81
PSMD3-204ENST00000540504 APBA2Q99767 749 aa20.14■□□□□ 0.81
PSMD3-204ENST00000540504 RPAP3Q9H6T3 665 aaPredicted RBP20.14■□□□□ 0.81
PSMD3-204ENST00000540504 BAZ2AQ9UIF9 1905 aaKnown RBP20.14■□□□□ 0.81
PSMD3-204ENST00000540504 PRKAB2O43741 272 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 CNMDO75829 334 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 CYP2D6P10635 497 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 EVX2Q03828 476 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 PAWRQ96IZ0 340 aaKnown RBP20.13■□□□□ 0.81
PSMD3-204ENST00000540504 DCTPP1Q9H773 170 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 HOXC10Q9NYD6 342 aa20.13■□□□□ 0.81
PSMD3-204ENST00000540504 A0A1W2PRG0 241 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
PSMD3-204ENST00000540504 EVI5O60447 810 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 PRKAR2AP13861 404 aaKnown RBP20.12■□□□□ 0.81
PSMD3-204ENST00000540504 FXR1P51114 621 aaKnown RBP eCLIP20.12■□□□□ 0.81
PSMD3-204ENST00000540504 MAP2K5Q13163 448 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 COG2Q14746 738 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 SLFNL1Q499Z3 407 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 SLC44A5Q8NCS7 719 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 LPAR1Q92633 364 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 GPATCH3Q96I76 525 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 SH2D4AQ9H788 454 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 ARHGEF10LQ9HCE6 1279 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 OGDHLQ9ULD0 1010 aa20.12■□□□□ 0.81
PSMD3-204ENST00000540504 SLC15A5A6NIM6 579 aa20.11■□□□□ 0.81
PSMD3-204ENST00000540504 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
PSMD3-204ENST00000540504 CHRDL2Q6WN34 429 aa20.11■□□□□ 0.81
PSMD3-204ENST00000540504 DYNLL2Q96FJ2 89 aa20.11■□□□□ 0.81
PSMD3-204ENST00000540504 SLC4A4Q9Y6R1 1079 aa20.11■□□□□ 0.81
PSMD3-204ENST00000540504 IVNS1ABPQ9Y6Y0 642 aa20.11■□□□□ 0.81
PSMD3-204ENST00000540504 CEP290O15078 2479 aa20.1■□□□□ 0.81
PSMD3-204ENST00000540504 USP17L12C9JPN9 530 aa20.1■□□□□ 0.81
PSMD3-204ENST00000540504 USP17L21D6R901 530 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms