RNA–Protein interactions for RNA: ENST00000540242.2

C1R-205, Transcript of complement C1r, humanhuman

TSL 4

Gene C1R, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-205ENST00000540242 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
C1R-205ENST00000540242 USP17L12C9JPN9 530 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 USP17L21D6R901 530 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 SPICE1Q8N0Z3 855 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 COA7Q96BR5 231 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
C1R-205ENST00000540242 TBC1D2Q9BYX2 928 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
C1R-205ENST00000540242 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
C1R-205ENST00000540242 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
C1R-205ENST00000540242 C19orf81C9J6K1 198 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 HOXA7P31268 230 aaPredicted RBP14.35□□□□□ -0.11
C1R-205ENST00000540242 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.11
C1R-205ENST00000540242 CCL14Q16627 93 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 SIAH1Q8IUQ4 282 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 DIS3LQ8TF46 1054 aaKnown RBP14.35□□□□□ -0.11
C1R-205ENST00000540242 U2AF1L4Q8WU68 220 aaKnown RBP14.35□□□□□ -0.11
C1R-205ENST00000540242 TRIB2Q92519 343 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 DEFB118Q96PH6 123 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
C1R-205ENST00000540242 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
C1R-205ENST00000540242 CABP5Q9NP86 173 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 MORF4L1Q9UBU8 362 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 DOCK3Q8IZD9 2030 aa14.35□□□□□ -0.11
C1R-205ENST00000540242 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
C1R-205ENST00000540242 GCLCP48506 637 aaPredicted RBP14.34□□□□□ -0.11
C1R-205ENST00000540242 CDK8P49336 464 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 ERVK-9P63128 1117 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 ERVK-24P63145 666 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 WDR78Q5VTH9 848 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 CERS3Q8IU89 383 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 PI4K2BQ8TCG2 481 aa14.34□□□□□ -0.11
C1R-205ENST00000540242 SPDYE16A6NNV3 312 aaPredicted RBP14.33□□□□□ -0.12
C1R-205ENST00000540242 IGSF3O75054 1194 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 GJA8P48165 433 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 UBXN2AP68543 259 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 ATP2B2Q01814 1243 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 CATSPERGQ6ZRH7 1159 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 CHMP4CQ96CF2 233 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 C12orf42Q96LP6 360 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
C1R-205ENST00000540242 KIAA1683Q9H0B3 1180 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 PLXNB2O15031 1838 aa14.33□□□□□ -0.12
C1R-205ENST00000540242 GSG1L2A8MUP6 293 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L15C9J2P7 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L13C9JLJ4 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L11C9JVI0 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L18D6R9N7 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L22D6RA61 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L17D6RBQ6 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L19D6RCP7 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L20D6RJB6 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 PRDM1O75626 825 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 GJB1P08034 283 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 ICA1Q05084 483 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 USP17L24Q0WX57 530 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 IRF5Q13568 498 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
C1R-205ENST00000540242 MINDY4BA8MYZ0 360 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 H0YGN5 161 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
C1R-205ENST00000540242 RAD21O60216 631 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
C1R-205ENST00000540242 C16orf86Q6ZW13 317 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
C1R-205ENST00000540242 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.31□□□□□ -0.12
C1R-205ENST00000540242 ATP8A2Q9NTI2 1148 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 FBXO28Q9NVF7 368 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 FLRT1Q9NZU1 646 aa14.31□□□□□ -0.12
C1R-205ENST00000540242 GPAA1O43292 621 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 SGPL1O95470 568 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 TFRCP02786 760 aaKnown RBP14.3□□□□□ -0.12
C1R-205ENST00000540242 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
C1R-205ENST00000540242 CCND3P30281 292 aaPredicted RBP14.3□□□□□ -0.12
C1R-205ENST00000540242 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 TMEM179Q6ZVK1 233 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 UBE2Q1Q7Z7E8 422 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 PXYLP1Q8TE99 480 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 APPBP2Q92624 585 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 DPF3Q92784 378 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 ATG4CQ96DT6 458 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
C1R-205ENST00000540242 NUP88Q99567 741 aaPredicted RBP14.3□□□□□ -0.12
C1R-205ENST00000540242 PAK6Q9NQU5 681 aaPredicted RBP14.3□□□□□ -0.12
C1R-205ENST00000540242 HMGCRP04035 888 aa14.29□□□□□ -0.12
C1R-205ENST00000540242 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
C1R-205ENST00000540242 MX1P20591 662 aa14.29□□□□□ -0.12
C1R-205ENST00000540242 USP14P54578 494 aa14.29□□□□□ -0.12
C1R-205ENST00000540242 MORN1Q5T089 497 aa14.29□□□□□ -0.12
C1R-205ENST00000540242 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms