RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DMTNQ08495 405 aa15.58■□□□□ 0.08
BNIP3-202ENST00000540159 PTGDRQ13258 359 aa15.58■□□□□ 0.08
BNIP3-202ENST00000540159 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
BNIP3-202ENST00000540159 SEC23AQ15436 765 aa15.58■□□□□ 0.08
BNIP3-202ENST00000540159 IQCA1Q86XH1 822 aa15.58■□□□□ 0.08
BNIP3-202ENST00000540159 REXO1L1PQ8IX06 675 aa15.58■□□□□ 0.08
BNIP3-202ENST00000540159 FAM84BQ96KN1 310 aaPredicted RBP15.58■□□□□ 0.08
BNIP3-202ENST00000540159 FOXP1Q9H334 677 aaPredicted RBP15.58■□□□□ 0.08
BNIP3-202ENST00000540159 DDX41Q9UJV9 622 aaKnown RBP15.58■□□□□ 0.08
BNIP3-202ENST00000540159 KRT2P35908 639 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 TEX35Q5T0J7 233 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 CDC5LQ99459 802 aaKnown RBP15.57■□□□□ 0.08
BNIP3-202ENST00000540159 RIOK1Q9BRS2 568 aaKnown RBP15.57■□□□□ 0.08
BNIP3-202ENST00000540159 OGFRQ9NZT2 677 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 HOOK1Q9UJC3 728 aaKnown RBP15.57■□□□□ 0.08
BNIP3-202ENST00000540159 MINPP1Q9UNW1 487 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 GNAT2P19087 354 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 NLRP5P59047 1200 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 CTR9Q6PD62 1173 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 TRIM65Q6PJ69 517 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 SRBD1Q8N5C6 995 aaKnown RBP15.57■□□□□ 0.08
BNIP3-202ENST00000540159 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 DYNLL2Q96FJ2 89 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 SRPRBQ9Y5M8 271 aaKnown RBP15.57■□□□□ 0.08
BNIP3-202ENST00000540159 COL1A1P02452 1464 aaPredicted RBP15.57■□□□□ 0.08
BNIP3-202ENST00000540159 LRP6O75581 1613 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 USP17L8P0C7I0 530 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 PIP4K2BP78356 416 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 DPYDQ12882 1025 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 TC2NQ8N9U0 490 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 UBXN4Q92575 508 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 CTNND2Q9UQB3 1225 aa15.57■□□□□ 0.08
BNIP3-202ENST00000540159 TSPY2A6NKD2 308 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 CLCN6P51797 869 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 MECOMQ03112 1051 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
BNIP3-202ENST00000540159 TBC1D9BQ66K14 1250 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 SPECC1LQ69YQ0 1117 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 VPS16Q9H269 839 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 STK36Q9NRP7 1315 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 ECM29Q5VYK3 1845 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 PSDA5PKW4 1024 aaPredicted RBP15.56■□□□□ 0.08
BNIP3-202ENST00000540159 PP2D1A8MPX8 630 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 SLC44A5Q8NCS7 719 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
BNIP3-202ENST00000540159 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
BNIP3-202ENST00000540159 MORC3Q14149 939 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 TMEM139Q8IV31 216 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 PAGE5Q96GU1 130 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 MRPL44Q9H9J2 332 aaKnown RBP15.55■□□□□ 0.08
BNIP3-202ENST00000540159 MCM9Q9NXL9 1143 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
BNIP3-202ENST00000540159 ABL1P00519 1130 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 GOLGA8HP0CJ92 632 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 XBP1P17861 261 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 RBL2Q08999 1139 aa15.55■□□□□ 0.08
BNIP3-202ENST00000540159 POLR3GO15318 223 aaPredicted RBP15.54■□□□□ 0.08
BNIP3-202ENST00000540159 TROAPQ12815 778 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 DHX8Q14562 1220 aaKnown RBP15.54■□□□□ 0.08
BNIP3-202ENST00000540159 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 TTC38Q5R3I4 469 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 LINC00116Q8NCU8 138 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 CHD4Q14839 1912 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 SYNRGQ9UMZ2 1314 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 ERCC3P19447 782 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 PARP10Q53GL7 1025 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 STAG2Q8N3U4 1231 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 IGSF22Q8N9C0 903 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 CTCFLQ8NI51 663 aaPredicted RBP15.54■□□□□ 0.08
BNIP3-202ENST00000540159 CCDC12Q8WUD4 166 aaPredicted RBP15.54■□□□□ 0.08
BNIP3-202ENST00000540159 CCDC34Q96HJ3 373 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
BNIP3-202ENST00000540159 CUL4BQ13620 913 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 TMTC2Q8N394 836 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 FEZ1Q99689 392 aa15.54■□□□□ 0.08
BNIP3-202ENST00000540159 SAP30BPQ9UHR5 308 aaKnown RBP15.54■□□□□ 0.08
BNIP3-202ENST00000540159 PLEKHG2Q9H7P9 1386 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 USP17L3A6NCW0 530 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 USP17L4A6NCW7 530 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 CASQ1P31415 396 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 RRAGBQ5VZM2 374 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 USP17L1Q7RTZ2 530 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 MLKLQ8NB16 471 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 RNF26Q9BY78 433 aaPredicted RBP15.53■□□□□ 0.08
BNIP3-202ENST00000540159 CEP131Q9UPN4 1083 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 GDAQ9Y2T3 454 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 CASP14P31944 242 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 UIMC1Q96RL1 719 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 PHF20Q9BVI0 1012 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 TAB2Q9NYJ8 693 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 STX8Q9UNK0 236 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 TFR2Q9UP52 801 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
BNIP3-202ENST00000540159 MYH13Q9UKX3 1938 aa15.52■□□□□ 0.08
BNIP3-202ENST00000540159 FAM237AA0A1B0GTK4 181 aa15.52■□□□□ 0.08
BNIP3-202ENST00000540159 KIF2AO00139 706 aaPredicted RBP15.52■□□□□ 0.08
BNIP3-202ENST00000540159 ARHGAP6O43182 974 aa15.52■□□□□ 0.08
BNIP3-202ENST00000540159 ZNF18P17022 549 aa15.52■□□□□ 0.08
BNIP3-202ENST00000540159 FUT2Q10981 343 aa15.52■□□□□ 0.08
BNIP3-202ENST00000540159 AMIGO3Q86WK7 504 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms