RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MAST3O60307 1309 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CTAGE15A4D2H0 777 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CTAGE8P0CG41 777 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 PPFIA1Q13136 1202 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 IFI16Q16666 785 aaKnown RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 ME3Q16798 604 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 DAAM2Q86T65 1068 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CTAGE6Q86UF2 777 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CTAGE4Q8IX94 777 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CCDC65Q8IXS2 484 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 SMARCC2Q8TAQ2 1214 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 NUP98P52948 1817 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 FGFR1OPO95684 399 aaKnown RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 LACTBP83111 547 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 PDE1CQ14123 709 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 MAP7Q14244 749 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CFAP58Q5T655 872 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 TRIM68Q6AZZ1 485 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 PNMA8AQ86V59 439 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 TAF4BQ92750 862 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 TBC1D31Q96DN5 1066 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 DDX27Q96GQ7 796 aaKnown RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 TMEM87BQ96K49 555 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 NAP1L3Q99457 506 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 HSPD1P10809 573 aaKnown RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 WASHC4Q2M389 1173 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 FAM210AQ96ND0 272 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 RNF41Q9H4P4 317 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 MAGEA9P43362 315 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 DYNC1I2Q13409 638 aaKnown RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 THEGQ9P2T0 379 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 TPCN1Q9ULQ1 816 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ZNF330Q9Y3S2 320 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 COL5A3P25940 1745 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 MYH7P12883 1935 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 LOC102724428A0A0B4J2F2 783 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SEC31AO94979 1220 aaKnown RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SIK1P57059 783 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 EXOSC10Q01780 885 aaKnown RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ADCK5Q3MIX3 580 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ZNF589Q86UQ0 364 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 NBPF5PQ86XG9 351 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 DNAJC25Q9H1X3 360 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 KCNG1Q9UIX4 513 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 CEP131Q9UPN4 1083 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ZBTB1Q9Y2K1 713 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 TACC1O75410 805 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SCN7AQ01118 1682 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 LRRC24Q50LG9 513 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 MOV10L1Q9BXT6 1211 aaKnown RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 BIN1O00499 593 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 CYP21A2P08686 494 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ACTN2P35609 894 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 IRX4P78413 519 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 Q6ZUG5 572 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 TMTC2Q8N394 836 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 MORC4Q8TE76 937 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 FBF1Q8TES7 1133 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SEPT7Q16181 437 aaKnown RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SPECC1Q5M775 1068 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 TTC19Q6DKK2 380 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-214ENST00000540109 BRAPQ7Z569 592 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 GPT2Q8TD30 523 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 FAM89AQ96GI7 184 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ALS2CR12Q96Q35 445 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 SH3GL3Q99963 347 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 KRT23Q9C075 422 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 DNAI2Q9GZS0 605 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ANKRD2Q9GZV1 360 aa6.79□□□□□ -1.32
PTPRD-214ENST00000540109 ZNF213O14771 459 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 ADD2P35612 726 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 MAP3K9P80192 1104 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 SF3A3Q12874 501 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 UBE4AQ14139 1066 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 HSP90AA5PQ58FG0 334 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 CACNA2D3Q8IZS8 1091 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 CEP63Q96MT8 703 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 DDX60Q8IY21 1712 aaKnown RBP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 PNPLA7Q6ZV29 1317 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 E7EWF7 191 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 NDC80O14777 642 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 YEATS4O95619 227 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 BMP15O95972 392 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 CRKLP46109 303 aaKnown RBP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 PYCARDQ9ULZ3 195 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 ATP2B1P20020 1258 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 FGFR2P21802 821 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 FKBP4Q02790 459 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 HLTFQ14527 1009 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 KARSQ15046 597 aaKnown RBP6.78□□□□□ -1.32
PTPRD-214ENST00000540109 PODNQ7Z5L7 613 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 VGLL2Q8N8G2 317 aa6.78□□□□□ -1.32
PTPRD-214ENST00000540109 ABTB1Q969K4 478 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms