RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 MTMR10Q9NXD2 777 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 DBNLQ9UJU6 430 aaKnown RBP24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 STXBP5LQ9Y2K9 1186 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 CCNA1P78396 465 aa24.38■■□□□ 1.49
LPCAT3-210ENST00000540090 CATSPERGQ6ZRH7 1159 aa24.38■■□□□ 1.49
LPCAT3-210ENST00000540090 CERS3Q8IU89 383 aa24.38■■□□□ 1.49
LPCAT3-210ENST00000540090 NOP58Q9Y2X3 529 aaKnown RBP24.38■■□□□ 1.49
LPCAT3-210ENST00000540090 GLRX3O76003 335 aaKnown RBP24.37■■□□□ 1.49
LPCAT3-210ENST00000540090 USP14P54578 494 aa24.37■■□□□ 1.49
LPCAT3-210ENST00000540090 EHD4Q9H223 541 aa24.37■■□□□ 1.49
LPCAT3-210ENST00000540090 CWC22Q9HCG8 908 aaKnown RBP24.37■■□□□ 1.49
LPCAT3-210ENST00000540090 SERPINB13Q9UIV8 391 aa24.37■■□□□ 1.49
LPCAT3-210ENST00000540090 PTPREP23469 700 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 USP5P45974 858 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 MFSD14CQ5VZR4 134 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 LBX2Q6XYB7 198 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 MIGA1Q8NAN2 632 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 FEZ1Q99689 392 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 KIAA1683Q9H0B3 1180 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 FLRT1Q9NZU1 646 aa24.36■■□□□ 1.49
LPCAT3-210ENST00000540090 SLC15A5A6NIM6 579 aa24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 IDH1O75874 414 aaKnown RBP24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 ZYXQ15942 572 aaKnown RBP24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 ZKSCAN2Q63HK3 967 aa24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 EAF2Q96CJ1 260 aaPredicted RBP24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 CCDC8Q9H0W5 538 aaPredicted RBP24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 TLR7Q9NYK1 1049 aaKnown RBP24.35■■□□□ 1.49
LPCAT3-210ENST00000540090 MAST2Q6P0Q8 1798 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 HOXC6P09630 235 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 MDM2Q00987 491 aaPredicted RBP24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 RAB3GAP1Q15042 981 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 CERKLQ49MI3 558 aaPredicted RBP24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 TTC6Q86TZ1 520 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 MAGEB6Q8N7X4 407 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 ACER1Q8TDN7 264 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 NDUFB9Q9Y6M9 179 aa24.34■■□□□ 1.49
LPCAT3-210ENST00000540090 CCER2I3L3R5 266 aa24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 VCAM1P19320 739 aa24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 ABCB5Q2M3G0 1257 aa24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 TMED8Q6PL24 325 aaPredicted RBP24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 SENP6Q9GZR1 1112 aaPredicted RBP24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 BTBD7Q9P203 1132 aa24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 DDX20Q9UHI6 824 aaKnown RBP24.33■■□□□ 1.49
LPCAT3-210ENST00000540090 FOCADQ5VW36 1801 aa24.33■■□□□ 1.48
LPCAT3-210ENST00000540090 CDK5RAP2Q96SN8 1893 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 MSCO60682 206 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 GRB14Q14449 540 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 WDR78Q5VTH9 848 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 LPAR1Q92633 364 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 C1orf115Q9H7X2 142 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 CABP5Q9NP86 173 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 DNAH12Q6ZR08 3092 aa24.32■■□□□ 1.48
LPCAT3-210ENST00000540090 IGHA2P01877 340 aa24.31■■□□□ 1.48
LPCAT3-210ENST00000540090 ATP2B2Q01814 1243 aa24.31■■□□□ 1.48
LPCAT3-210ENST00000540090 MAP3K12Q12852 859 aa24.31■■□□□ 1.48
LPCAT3-210ENST00000540090 ANTXR1Q9H6X2 564 aa24.31■■□□□ 1.48
LPCAT3-210ENST00000540090 POTEB2H3BUK9 544 aa24.3■■□□□ 1.48
LPCAT3-210ENST00000540090 SHMT1P34896 483 aa24.3■■□□□ 1.48
LPCAT3-210ENST00000540090 PLCD1P51178 756 aa24.3■■□□□ 1.48
LPCAT3-210ENST00000540090 NPLOC4Q8TAT6 608 aa24.3■■□□□ 1.48
LPCAT3-210ENST00000540090 IVNS1ABPQ9Y6Y0 642 aa24.3■■□□□ 1.48
LPCAT3-210ENST00000540090 SPDYE16A6NNV3 312 aaPredicted RBP24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 GUCY1A2P33402 732 aa24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 FAM109BQ6ICB4 259 aaPredicted RBP24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 RIOK1Q9BRS2 568 aaKnown RBP24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 RPAP3Q9H6T3 665 aaPredicted RBP24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 MYO5AQ9Y4I1 1855 aaKnown RBP24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 CUL9Q8IWT3 2517 aa24.29■■□□□ 1.48
LPCAT3-210ENST00000540090 DNM1LO00429 736 aa24.28■■□□□ 1.48
LPCAT3-210ENST00000540090 CNGA1P29973 690 aa24.28■■□□□ 1.48
LPCAT3-210ENST00000540090 CYP2C19P33261 490 aa24.28■■□□□ 1.48
LPCAT3-210ENST00000540090 TRPV1Q8NER1 839 aa24.28■■□□□ 1.48
LPCAT3-210ENST00000540090 LBHD1Q9BQE6 289 aaPredicted RBP24.28■■□□□ 1.48
LPCAT3-210ENST00000540090 LAMA2P24043 3122 aaKnown RBP24.28■■□□□ 1.48
LPCAT3-210ENST00000540090 GABPAQ06546 454 aa24.27■■□□□ 1.48
LPCAT3-210ENST00000540090 HOXC10Q9NYD6 342 aa24.27■■□□□ 1.48
LPCAT3-210ENST00000540090 ATN1P54259 1190 aaPredicted RBP24.26■■□□□ 1.47
LPCAT3-210ENST00000540090 COG2Q14746 738 aa24.26■■□□□ 1.47
LPCAT3-210ENST00000540090 SEPT2Q15019 361 aa24.26■■□□□ 1.47
LPCAT3-210ENST00000540090 UNC80Q8N2C7 3258 aa24.26■■□□□ 1.47
LPCAT3-210ENST00000540090 STRNO43815 780 aa24.25■■□□□ 1.47
LPCAT3-210ENST00000540090 POLR3DP05423 398 aaPredicted RBP24.25■■□□□ 1.47
LPCAT3-210ENST00000540090 CYBAP13498 195 aa24.25■■□□□ 1.47
LPCAT3-210ENST00000540090 DPP9Q86TI2 863 aa24.25■■□□□ 1.47
LPCAT3-210ENST00000540090 MOV10L1Q9BXT6 1211 aaKnown RBP24.25■■□□□ 1.47
LPCAT3-210ENST00000540090 MYH1P12882 1939 aa24.25■■□□□ 1.47
LPCAT3-210ENST00000540090 A0A1W2PRG0 241 aa24.24■■□□□ 1.47
LPCAT3-210ENST00000540090 OLFML2BQ68BL8 750 aa24.24■■□□□ 1.47
LPCAT3-210ENST00000540090 FTSJ3Q8IY81 847 aaKnown RBP24.24■■□□□ 1.47
LPCAT3-210ENST00000540090 ARRDC4Q8NCT1 418 aa24.24■■□□□ 1.47
LPCAT3-210ENST00000540090 MAGEB6P1A0A0J9YX57 407 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 ADORA2AP29274 412 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 RTP1P59025 263 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 AACSQ86V21 672 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 ITPRIPQ8IWB1 547 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 GUCD1Q96NT3 240 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 SPATC1LQ9H0A9 340 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 PRKAG2Q9UGJ0 569 aa24.23■■□□□ 1.47
LPCAT3-210ENST00000540090 RLBP1P12271 317 aa24.22■■□□□ 1.47
LPCAT3-210ENST00000540090 CEP85Q6P2H3 762 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms