RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 RUFY2Q8WXA3 655 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 DSCC1Q9BVC3 393 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 ANAPC4Q9UJX5 808 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 PLIN4Q96Q06 1357 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 IRF6O14896 467 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 GH2P01242 217 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 ASNSP08243 561 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 RASA1P20936 1047 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 CDK8P49336 464 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 KIF23Q02241 960 aaPredicted RBP8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 ABCB5Q2M3G0 1257 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 CERKLQ49MI3 558 aaPredicted RBP8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 CCDC84Q86UT8 332 aaPredicted RBP8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 NBPF3Q9H094 633 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 GINM1Q9NU53 330 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 KCNH4Q9UQ05 1017 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 RLFQ13129 1914 aa8.31□□□□□ -1.08
LPCAT3-209ENST00000540060 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 MANSC4A6NHS7 340 aaPredicted RBP8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 GUCY1A2P33402 732 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 GTF2A2P52657 109 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 PTH1RQ03431 593 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 SREBF2Q12772 1141 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 TBC1D10CQ8IV04 446 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 TBC1D2Q9BYX2 928 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 AFG3L2Q9Y4W6 797 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 TACC3Q9Y6A5 838 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 ZHX2Q9Y6X8 837 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 MGAMO43451 1857 aa8.3□□□□□ -1.08
LPCAT3-209ENST00000540060 ZSWIM8A7E2V4 1837 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 COL11A1P12107 1806 aaPredicted RBP8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 CCL15-CCL14A0A0B4J2E2 113 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 A0A0G2JLL6 359 aaPredicted RBP8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 TRIM75PA6NK02 468 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 IGF2BP3O00425 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 CXCL11O14625 94 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 PRDM1O75626 825 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 SLC3A2P08195 630 aaKnown RBP8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 FGRP09769 529 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 AKR1B1P15121 316 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 TM4SF4P48230 202 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 HAND2P61296 217 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 PDE4BQ07343 736 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 SNAPC2Q13487 334 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 MOGSQ13724 837 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 SEPT2Q15019 361 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 CCL15Q16663 113 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 TMEM179Q6ZVK1 233 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 PRRT2Q7Z6L0 340 aaPredicted RBP8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 BRI3BPQ8WY22 251 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 WDR18Q9BV38 432 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 LSG1Q9H089 658 aaKnown RBP8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 AS3MTQ9HBK9 375 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 ZNF287Q9HBT7 754 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 GTF3C3Q9Y5Q9 886 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 NEDD4P46934 1319 aa8.29□□□□□ -1.08
LPCAT3-209ENST00000540060 IGKV6D-41A0A0C4DH26 115 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 MPHOSPH10O00566 681 aaKnown RBP8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 ORC4O43929 436 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 CETPP11597 493 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 INHBEP58166 350 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 MAP2K1Q02750 393 aaPredicted RBP8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 ICA1Q05084 483 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 DGKZQ13574 1117 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 MTMR2Q13614 643 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 RAB3GAP1Q15042 981 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 IMMTQ16891 758 aaKnown RBP8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 IFNL1Q8IU54 200 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 CLEC10AQ8IUN9 316 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 STAG1Q8WVM7 1258 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 MAP4K1Q92918 833 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 PTPN18Q99952 460 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 MKNK2Q9HBH9 465 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 ANO2Q9NQ90 1003 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 WBP1LQ9NX94 342 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 CTNNA3Q9UI47 895 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 HTTP42858 3142 aa8.28□□□□□ -1.08
LPCAT3-209ENST00000540060 ZNF213O14771 459 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 CYP21A2P08686 494 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 VASPP50552 380 aaPredicted RBP8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 HMGCS2P54868 508 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 BACE1P56817 501 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 SPP2Q13103 211 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms