RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZNF280AP59817 542 aaPredicted RBP8.9□□□□□ -0.98
CCDC60-204ENST00000539847 DNM1Q05193 864 aaKnown RBP8.9□□□□□ -0.98
CCDC60-204ENST00000539847 NECTIN1Q15223 517 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 TERF2Q15554 542 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 PKN2Q16513 984 aaKnown RBP8.9□□□□□ -0.98
CCDC60-204ENST00000539847 POTEBQ6S5H4 581 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 G2E3Q7L622 706 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 SLC51AQ86UW1 340 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 AGBL3Q8NEM8 1001 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 ISCA1Q9BUE6 129 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 NBPF3Q9H094 633 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 ZSCAN16Q9H4T2 348 aaPredicted RBP8.9□□□□□ -0.98
CCDC60-204ENST00000539847 ZNF408Q9H9D4 720 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 CBX8Q9HC52 389 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 CALCOCO1Q9P1Z2 691 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 CASP8AP2Q9UKL3 1982 aa8.9□□□□□ -0.99
CCDC60-204ENST00000539847 PITPNM2Q9BZ72 1349 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 FIBPO43427 364 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 ECE2O60344 883 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 PTGS1P23219 599 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 U2AF2P26368 475 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 ZNF157P51786 506 aaPredicted RBP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 GSDMDP57764 484 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 RPS8P62241 208 aaKnown RBP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 FGD1P98174 961 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 KIF23Q02241 960 aaPredicted RBP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 NR6A1Q15406 480 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 MORN1Q5T089 497 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 LARP1BQ659C4 914 aaKnown RBP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 CEP135Q66GS9 1140 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 SLC4A10Q6U841 1118 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 ANKRD13DQ6ZTN6 518 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 NYAP1Q6ZVC0 841 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 CTU1Q7Z7A3 348 aaKnown RBP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 MAP4K1Q92918 833 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 EVI5LQ96CN4 794 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 GPATCH3Q96I76 525 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 ZIC5Q96T25 663 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 TNMDQ9H2S6 317 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 RNF186Q9NXI6 227 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 HMG20BQ9P0W2 317 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 IMPACTQ9P2X3 320 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 DBF4Q9UBU7 674 aaPredicted RBP8.89□□□□□ -0.99
CCDC60-204ENST00000539847 POLLQ9UGP5 575 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 SLC27A5Q9Y2P5 690 aa8.89□□□□□ -0.99
CCDC60-204ENST00000539847 RTL9Q8NET4 1388 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 GOLGA6L4A6NEF3 574 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 BMS1Q14692 1282 aaKnown RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 TPD52L1Q16890 204 aaPredicted RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 KIF4BQ2VIQ3 1234 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 ZNF771Q7L3S4 317 aaPredicted RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 TTC6Q86TZ1 520 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 LRRC8AQ8IWT6 810 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 C17orf53Q8N3J3 647 aaPredicted RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 TBC1D16Q8TBP0 767 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 TRIM5Q9C035 493 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 DBNDD1Q9H9R9 158 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 CFAP45Q9UL16 551 aa8.88□□□□□ -0.99
CCDC60-204ENST00000539847 MAFBQ9Y5Q3 323 aaPredicted RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 LRRFIP2Q9Y608 721 aaKnown RBP8.88□□□□□ -0.99
CCDC60-204ENST00000539847 LAMB2P55268 1798 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 SHTN1A0MZ66 631 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 F6X3S4 739 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 CCP110O43303 1012 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 SURF6O75683 361 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 TRPA1O75762 1119 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 ANXA1P04083 346 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 TPM1P09493 284 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 CASTP20810 708 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 ZNF165P49910 485 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 GPSM2P81274 684 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 AIMP1Q12904 312 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 KRT32Q14532 448 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 IQCB1Q15051 598 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 PTPN14Q15678 1187 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 TBC1D10BQ4KMP7 808 aaPredicted RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 LHX8Q68G74 356 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 ZBTB38Q8NAP3 1195 aaPredicted RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 LEO1Q8WVC0 666 aaPredicted RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 CELF1Q92879 486 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 LLPHQ9BRT6 129 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 SRRTQ9BXP5 876 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 OSBPL5Q9H0X9 879 aaPredicted RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 L2HGDHQ9H9P8 463 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 ECHDC1Q9NTX5 307 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 GGA3Q9NZ52 723 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 CHPF2Q9P2E5 772 aa8.87□□□□□ -0.99
CCDC60-204ENST00000539847 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 DDX60Q8IY21 1712 aaKnown RBP8.87□□□□□ -0.99
CCDC60-204ENST00000539847 AK9Q5TCS8 1911 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 ADM5C9JUS6 153 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 IRS4O14654 1257 aaPredicted RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 ACTN4O43707 911 aaKnown RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 SLU7O95391 586 aaKnown RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 EGFRP00533 1210 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms