RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 WNT10BO00744 389 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 ORC4O43929 436 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 RPS12P25398 132 aaKnown RBP10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 DDIT3P35638 169 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 CDK8P49336 464 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 TRDNQ13061 729 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 STK3Q13188 491 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 TBC1D10BQ4KMP7 808 aaPredicted RBP10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 RASAL3Q86YV0 1011 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 RNF41Q9H4P4 317 aaPredicted RBP10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 CNNM2Q9H8M5 875 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 MYOZ2Q9NPC6 264 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 HTTP42858 3142 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 WDR19Q8NEZ3 1342 aa10.8□□□□□ -0.68
RTN4IP1-204ENST00000539449 FAM196BA6NMK8 535 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 RANBP6O60518 1105 aaKnown RBP10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 NMT2O60551 498 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 EN2P19622 333 aaPredicted RBP10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 RASA1P20936 1047 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 PDIA3P30101 505 aaKnown RBP10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 GABPAQ06546 454 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 SEC23AQ15436 765 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 NOM1Q5C9Z4 860 aaKnown RBP10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 C16orf86Q6ZW13 317 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 KRT26Q7Z3Y9 468 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 FBXL16Q8N461 479 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 IL27Q8NEV9 243 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 DPF2Q92785 391 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 ZSCAN31Q96LW9 406 aaPredicted RBP10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 LY9Q9HBG7 655 aa10.79□□□□□ -0.68
RTN4IP1-204ENST00000539449 CENPFP49454 3210 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 BRCA2P51587 3418 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 KLF18A0A0U1RQI7 1052 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 ADM5C9JUS6 153 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 H0YGN5 161 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 IFIT3O14879 490 aaKnown RBP10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 PFKFB2O60825 505 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 ENTPD3O75355 529 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 EVCP57679 992 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 CCT2P78371 535 aaKnown RBP10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 FGD1P98174 961 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 TFAP4Q01664 338 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 SCRN1Q12765 414 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 ANKRD1Q15327 319 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 TMEM67Q5HYA8 995 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 ESR2Q92731 530 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 TMEM87BQ96K49 555 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 DNAJC18Q9H819 358 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 VEZTQ9HBM0 779 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 NCOA5Q9HCD5 579 aaKnown RBP10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 RANBP2P49792 3224 aaKnown RBP10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 GREB1LQ9C091 1923 aaPredicted RBP10.78□□□□□ -0.68
RTN4IP1-204ENST00000539449 H7C1D1 291 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 FKTNO75072 461 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 RXRAP19793 462 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 SHMT1P34896 483 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 PDE4BQ07343 736 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 RRP1BQ14684 758 aaKnown RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 SHROOM1Q2M3G4 852 aaPredicted RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 RCSD1Q6JBY9 416 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 TTC6Q86TZ1 520 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 FAM151AQ8WW52 585 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZSCAN10Q96SZ4 725 aaPredicted RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 MKNK2Q9HBH9 465 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 SH2B1Q9NRF2 756 aaPredicted RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 NAP1L2Q9ULW6 460 aaPredicted RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 ANGEL1Q9UNK9 670 aaKnown RBP10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 TNKSO95271 1327 aa10.77□□□□□ -0.69
RTN4IP1-204ENST00000539449 JAK2O60674 1132 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 PCP11498 1178 aaKnown RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 AKR1B1P15121 316 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 JAG1P78504 1218 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 KIF4BQ2VIQ3 1234 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 ENAHQ8N8S7 591 aaPredicted RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 GTF3C6Q969F1 213 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZNF274Q96GC6 653 aaPredicted RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 TMEM39BQ9GZU3 492 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 FAM217BQ9NTX9 383 aaPredicted RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 ATRNL1Q5VV63 1379 aa10.76□□□□□ -0.69
RTN4IP1-204ENST00000539449 COL2A1P02458 1487 aaPredicted RBP10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 TSPY2A6NKD2 308 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 PPFIA3O75145 1194 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 HLA-DOAP06340 250 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 CDC27P30260 824 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 LIFRP42702 1097 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 PKP1Q13835 747 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms