RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TAF1CQ15572 869 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-206ENST00000539417 SH3D19Q5HYK7 790 aa18.76■□□□□ 0.59
RPAIN-206ENST00000539417 FAM47AQ5JRC9 791 aa18.76■□□□□ 0.59
RPAIN-206ENST00000539417 KIAA1755Q5JYT7 1200 aa18.76■□□□□ 0.59
RPAIN-206ENST00000539417 COL13A1Q5TAT6 717 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-206ENST00000539417 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
RPAIN-206ENST00000539417 CFHR5Q9BXR6 569 aa18.76■□□□□ 0.59
RPAIN-206ENST00000539417 ANAPC4Q9UJX5 808 aa18.76■□□□□ 0.59
RPAIN-206ENST00000539417 USP17L10C9JJH3 530 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 ALDH1A1P00352 501 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 CYP2C8P10632 490 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 MFAP1P55081 439 aaKnown RBP18.75■□□□□ 0.59
RPAIN-206ENST00000539417 OTUD7BQ6GQQ9 843 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 CCDC17Q96LX7 622 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 TAOK2Q9UL54 1235 aa18.75■□□□□ 0.59
RPAIN-206ENST00000539417 GPR25O00155 361 aa18.74■□□□□ 0.59
RPAIN-206ENST00000539417 DSCC1Q9BVC3 393 aa18.74■□□□□ 0.59
RPAIN-206ENST00000539417 ZMYM6O95789 1325 aa18.74■□□□□ 0.59
RPAIN-206ENST00000539417 RAD50Q92878 1312 aa18.74■□□□□ 0.59
RPAIN-206ENST00000539417 LAMA4Q16363 1823 aa18.73■□□□□ 0.59
RPAIN-206ENST00000539417 ADGRA2Q96PE1 1338 aa18.73■□□□□ 0.59
RPAIN-206ENST00000539417 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
RPAIN-206ENST00000539417 FASTKD5Q7L8L6 764 aaKnown RBP18.73■□□□□ 0.59
RPAIN-206ENST00000539417 ZNF296Q8WUU4 475 aaPredicted RBP18.73■□□□□ 0.59
RPAIN-206ENST00000539417 AGTPBP1Q9UPW5 1226 aa18.73■□□□□ 0.59
RPAIN-206ENST00000539417 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
RPAIN-206ENST00000539417 ICA1Q05084 483 aa18.72■□□□□ 0.59
RPAIN-206ENST00000539417 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
RPAIN-206ENST00000539417 PROCA1Q8NCQ7 364 aaPredicted RBP18.72■□□□□ 0.59
RPAIN-206ENST00000539417 RUFY2Q8WXA3 655 aa18.72■□□□□ 0.59
RPAIN-206ENST00000539417 FEZ1Q99689 392 aa18.72■□□□□ 0.59
RPAIN-206ENST00000539417 ESYT1Q9BSJ8 1104 aa18.72■□□□□ 0.59
RPAIN-206ENST00000539417 PRDM10Q9NQV6 1147 aa18.72■□□□□ 0.59
RPAIN-206ENST00000539417 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
RPAIN-206ENST00000539417 ZSWIM8A7E2V4 1837 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 NMT2O60551 498 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 FGRP09769 529 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 TFAP4Q01664 338 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 PDE4BQ07343 736 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 USP17L2Q6R6M4 530 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 KIAA1683Q9H0B3 1180 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 ZFYVE28Q9HCC9 887 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 ZCCHC17Q9NP64 241 aaKnown RBP18.71■□□□□ 0.59
RPAIN-206ENST00000539417 CPA4Q9UI42 421 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 NEDD4P46934 1319 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 PEX10O60683 326 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
RPAIN-206ENST00000539417 ORC4O43929 436 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 TLR2O60603 784 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 SLC3A2P08195 630 aaKnown RBP18.7■□□□□ 0.58
RPAIN-206ENST00000539417 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
RPAIN-206ENST00000539417 POTEEQ6S8J3 1075 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 NEDD1Q8NHV4 660 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 CEP95Q96GE4 821 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 C12orf42Q96LP6 360 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
RPAIN-206ENST00000539417 KANSL2Q9H9L4 492 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 IL17RBQ9NRM6 502 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 TMOD4Q9NZQ9 345 aa18.7■□□□□ 0.58
RPAIN-206ENST00000539417 ZNF213O14771 459 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-206ENST00000539417 VCAM1P19320 739 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 AKNAD1Q5T1N1 836 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 C17orf99Q6UX52 265 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 SPICE1Q8N0Z3 855 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 STAG1Q8WVM7 1258 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-206ENST00000539417 TMX2Q9Y320 296 aa18.69■□□□□ 0.58
RPAIN-206ENST00000539417 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
RPAIN-206ENST00000539417 CDC45O75419 566 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 TSPY3P0CV98 308 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 TSPY8P0CW00 308 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 MAP4K1Q92918 833 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 MTMR4Q9NYA4 1195 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 CLIP2Q9UDT6 1046 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 SLC45A1Q9Y2W3 748 aa18.68■□□□□ 0.58
RPAIN-206ENST00000539417 FKTNO75072 461 aa18.67■□□□□ 0.58
RPAIN-206ENST00000539417 CYP21A2P08686 494 aa18.67■□□□□ 0.58
RPAIN-206ENST00000539417 CTGFP29279 349 aa18.67■□□□□ 0.58
RPAIN-206ENST00000539417 NOM1Q5C9Z4 860 aaKnown RBP18.67■□□□□ 0.58
RPAIN-206ENST00000539417 CD99L2Q8TCZ2 262 aa18.67■□□□□ 0.58
RPAIN-206ENST00000539417 PARK7Q99497 189 aaKnown RBP18.67■□□□□ 0.58
RPAIN-206ENST00000539417 P2RX7Q99572 595 aaKnown RBP18.67■□□□□ 0.58
RPAIN-206ENST00000539417 ARHGAP39Q9C0H5 1083 aa18.67■□□□□ 0.58
RPAIN-206ENST00000539417 ARHGEF10LQ9HCE6 1279 aa18.67■□□□□ 0.58
RPAIN-206ENST00000539417 MYH4Q9Y623 1939 aa18.66■□□□□ 0.58
RPAIN-206ENST00000539417 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
RPAIN-206ENST00000539417 HOXA7P31268 230 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-206ENST00000539417 USP14P54578 494 aa18.66■□□□□ 0.58
RPAIN-206ENST00000539417 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
RPAIN-206ENST00000539417 LRRC47Q8N1G4 583 aaKnown RBP18.66■□□□□ 0.58
RPAIN-206ENST00000539417 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-206ENST00000539417 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
RPAIN-206ENST00000539417 NYAP2Q9P242 653 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms