RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 CCDC17Q96LX7 622 aa10.74□□□□□ -0.69
LRTOMT-216ENST00000539271 NACAP1Q9BZK3 213 aa10.74□□□□□ -0.69
LRTOMT-216ENST00000539271 MCOLN1Q9GZU1 580 aa10.74□□□□□ -0.69
LRTOMT-216ENST00000539271 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 CYP2C8P10632 490 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 AKR1B1P15121 316 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 SDSP20132 328 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 SEPT2Q15019 361 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 TTC22Q5TAA0 569 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 CD99L2Q8TCZ2 262 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 ACER1Q8TDN7 264 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 TMOD4Q9NZQ9 345 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 GREB1LQ9C091 1923 aaPredicted RBP10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 DOCK3Q8IZD9 2030 aa10.73□□□□□ -0.69
LRTOMT-216ENST00000539271 MPHOSPH10O00566 681 aaKnown RBP10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 BCRP11274 1271 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 GSPT1P15170 499 aaKnown RBP10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 CAP1Q01518 475 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 PABPC4Q13310 644 aaKnown RBP eCLIP10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 ALX1Q15699 326 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 VPS53Q5VIR6 699 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 CENPQQ7L2Z9 268 aaPredicted RBP10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 ZNF589Q86UQ0 364 aaPredicted RBP10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 FEZ1Q99689 392 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 KIAA1683Q9H0B3 1180 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 NAPBQ9H115 298 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 CPA4Q9UI42 421 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 PNMA3Q9UL41 463 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
LRTOMT-216ENST00000539271 HIP1O00291 1037 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 MGAMO43451 1857 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 RASA1P20936 1047 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 HOXA7P31268 230 aaPredicted RBP10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 USP14P54578 494 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 LACTBP83111 547 aaPredicted RBP10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 MLLT1Q03111 559 aaPredicted RBP10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 PPARAQ07869 468 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 CCDC171Q6TFL3 1326 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 OTOP1Q7RTM1 612 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 ASCC2Q9H1I8 757 aaPredicted RBP10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 DIAPH3Q9NSV4 1193 aa10.71□□□□□ -0.69
LRTOMT-216ENST00000539271 KIAA0100Q14667 2235 aaKnown RBP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 ZMYM6O95789 1325 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 A0A1W2PRG0 241 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 OSBPP22059 807 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 ICA1Q05084 483 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 CLEC10AQ8IUN9 316 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 SIAH1Q8IUQ4 282 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 STK11IPQ8N1F8 1099 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 SMCR8Q8TEV9 937 aaPredicted RBP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 EFCC1Q9HA90 598 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 MKNK2Q9HBH9 465 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 ZNF287Q9HBT7 754 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 TRIM17Q9Y577 477 aa10.7□□□□□ -0.7
LRTOMT-216ENST00000539271 HTTP42858 3142 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 MYH4Q9Y623 1939 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 PRDM1O75626 825 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 FGAP02671 866 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 NEFLP07196 543 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 CENPBP07199 599 aaPredicted RBP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 SLC3A2P08195 630 aaKnown RBP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 VCAM1P19320 739 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 CTGFP29279 349 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 GCLCP48506 637 aaPredicted RBP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 PDE4BQ07343 736 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 KIF22Q14807 665 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 ARHGEF6Q15052 776 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 FBXO46Q6PJ61 603 aaPredicted RBP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 P2RX7Q99572 595 aaKnown RBP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 ARHGAP39Q9C0H5 1083 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 ARHGEF10LQ9HCE6 1279 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 TMX2Q9Y320 296 aa10.69□□□□□ -0.7
LRTOMT-216ENST00000539271 RLFQ13129 1914 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 PLIN4Q96Q06 1357 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 IGKV6D-41A0A0C4DH26 115 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L15C9J2P7 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L13C9JLJ4 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L11C9JVI0 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L18D6R9N7 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L22D6RA61 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L17D6RBQ6 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L19D6RCP7 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 USP17L20D6RJB6 530 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 GNRH1P01148 92 aa10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 EEF2P13639 858 aaKnown RBP10.68□□□□□ -0.7
LRTOMT-216ENST00000539271 PSMC4P43686 418 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms