RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 FAM173BQ6P4H8 233 aa29.55■■■□□ 2.32
KLHL42-202ENST00000539176 MYOZ2Q9NPC6 264 aa29.55■■■□□ 2.32
KLHL42-202ENST00000539176 IL17RBQ9NRM6 502 aa29.55■■■□□ 2.32
KLHL42-202ENST00000539176 MYH15Q9Y2K3 1946 aa29.54■■■□□ 2.32
KLHL42-202ENST00000539176 TSPY3P0CV98 308 aa29.54■■■□□ 2.32
KLHL42-202ENST00000539176 TSPY8P0CW00 308 aa29.54■■■□□ 2.32
KLHL42-202ENST00000539176 FDPSP14324 419 aaKnown RBP29.54■■■□□ 2.32
KLHL42-202ENST00000539176 CDC27P30260 824 aa29.54■■■□□ 2.32
KLHL42-202ENST00000539176 NBPF9Q3BBW0 867 aa29.54■■■□□ 2.32
KLHL42-202ENST00000539176 IFIT1BQ5T764 474 aaKnown RBP29.54■■■□□ 2.32
KLHL42-202ENST00000539176 PPP1R9BQ96SB3 815 aa29.54■■■□□ 2.32
KLHL42-202ENST00000539176 NID2Q14112 1375 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 GOLGA6L4A6NEF3 574 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 FAM196BA6NMK8 535 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 GOLGA8AA7E2F4 631 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 HLA-DOAP06340 250 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 ADD1P35611 737 aaKnown RBP29.53■■■□□ 2.32
KLHL42-202ENST00000539176 ZNF654Q8IZM8 581 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 SERPINB13Q9UIV8 391 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 RPS12P25398 132 aaKnown RBP29.53■■■□□ 2.32
KLHL42-202ENST00000539176 SPDYE2Q495Y8 402 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 MICALL2Q8IY33 904 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 MTMR14Q8NCE2 650 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 ZBED3Q96IU2 234 aaPredicted RBP29.53■■■□□ 2.32
KLHL42-202ENST00000539176 ZNF396Q96N95 335 aaPredicted RBP29.53■■■□□ 2.32
KLHL42-202ENST00000539176 VEZTQ9HBM0 779 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 ZNF287Q9HBT7 754 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 TMOD2Q9NZR1 351 aa29.53■■■□□ 2.32
KLHL42-202ENST00000539176 ORC3Q9UBD5 711 aaPredicted RBP29.53■■■□□ 2.32
KLHL42-202ENST00000539176 RCSD1Q6JBY9 416 aa29.52■■■□□ 2.32
KLHL42-202ENST00000539176 TMTC2Q8N394 836 aa29.52■■■□□ 2.32
KLHL42-202ENST00000539176 NUP133Q8WUM0 1156 aa29.52■■■□□ 2.32
KLHL42-202ENST00000539176 FAM217BQ9NTX9 383 aaPredicted RBP29.52■■■□□ 2.32
KLHL42-202ENST00000539176 WNT10BO00744 389 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 NPM3O75607 178 aaKnown RBP29.51■■■□□ 2.31
KLHL42-202ENST00000539176 ZNF280AP59817 542 aaPredicted RBP29.51■■■□□ 2.31
KLHL42-202ENST00000539176 SYNE3Q6ZMZ3 975 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 ENTPD3O75355 529 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 RCAN1P53805 252 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 SAMD7Q7Z3H4 446 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 FAM43AQ8N2R8 423 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 C8orf76Q96K31 380 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 DNAJC18Q9H819 358 aa29.51■■■□□ 2.31
KLHL42-202ENST00000539176 CNOT7Q9UIV1 285 aaKnown RBP29.51■■■□□ 2.31
KLHL42-202ENST00000539176 SHMT1P34896 483 aa29.5■■■□□ 2.31
KLHL42-202ENST00000539176 FOSBP53539 338 aa29.5■■■□□ 2.31
KLHL42-202ENST00000539176 SCAF8Q9UPN6 1271 aaKnown RBP29.5■■■□□ 2.31
KLHL42-202ENST00000539176 DHX36Q9H2U1 1008 aaKnown RBP29.49■■■□□ 2.31
KLHL42-202ENST00000539176 RNF181Q9P0P0 153 aa29.49■■■□□ 2.31
KLHL42-202ENST00000539176 TFIP11Q9UBB9 837 aaKnown RBP29.49■■■□□ 2.31
KLHL42-202ENST00000539176 CNTNAP1P78357 1384 aa29.49■■■□□ 2.31
KLHL42-202ENST00000539176 AKR1B1P15121 316 aa29.48■■■□□ 2.31
KLHL42-202ENST00000539176 TBC1D10BQ4KMP7 808 aaPredicted RBP29.48■■■□□ 2.31
KLHL42-202ENST00000539176 CRACR2BQ8N4Y2 399 aaPredicted RBP29.48■■■□□ 2.31
KLHL42-202ENST00000539176 FBXO18Q8NFZ0 1043 aa29.48■■■□□ 2.31
KLHL42-202ENST00000539176 DDX19AQ9NUU7 478 aaKnown RBP29.48■■■□□ 2.31
KLHL42-202ENST00000539176 NEDD1Q8NHV4 660 aa29.48■■■□□ 2.31
KLHL42-202ENST00000539176 DPF2Q92785 391 aa29.48■■■□□ 2.31
KLHL42-202ENST00000539176 EHD4Q9H223 541 aa29.48■■■□□ 2.31
KLHL42-202ENST00000539176 ASTN2O75129 1339 aaPredicted RBP29.47■■■□□ 2.31
KLHL42-202ENST00000539176 BRAPQ7Z569 592 aa29.47■■■□□ 2.31
KLHL42-202ENST00000539176 PI4KBQ9UBF8 816 aa29.47■■■□□ 2.31
KLHL42-202ENST00000539176 SWAP70Q9UH65 585 aa29.47■■■□□ 2.31
KLHL42-202ENST00000539176 RCOR1Q9UKL0 485 aa29.47■■■□□ 2.31
KLHL42-202ENST00000539176 RTN1Q16799 776 aa29.46■■■□□ 2.31
KLHL42-202ENST00000539176 CATIPQ7Z7H3 387 aa29.46■■■□□ 2.31
KLHL42-202ENST00000539176 TRIM44Q96DX7 344 aaPredicted RBP29.46■■■□□ 2.31
KLHL42-202ENST00000539176 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.46■■■□□ 2.31
KLHL42-202ENST00000539176 ATRNL1Q5VV63 1379 aa29.46■■■□□ 2.31
KLHL42-202ENST00000539176 STK36Q9NRP7 1315 aa29.46■■■□□ 2.31
KLHL42-202ENST00000539176 CDAN1Q8IWY9 1227 aa29.46■■■□□ 2.31
KLHL42-202ENST00000539176 TCP11L1Q9NUJ3 509 aa29.46■■■□□ 2.31
KLHL42-202ENST00000539176 MYO1BO43795 1136 aa29.45■■■□□ 2.31
KLHL42-202ENST00000539176 CMTR1Q8N1G2 835 aaKnown RBP29.45■■■□□ 2.31
KLHL42-202ENST00000539176 FANCBQ8NB91 859 aa29.45■■■□□ 2.31
KLHL42-202ENST00000539176 PHKBQ93100 1093 aa29.45■■■□□ 2.31
KLHL42-202ENST00000539176 NT5C2P49902 561 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 NTRK3Q16288 839 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 SHROOM1Q2M3G4 852 aaPredicted RBP29.44■■■□□ 2.3
KLHL42-202ENST00000539176 CLEC10AQ8IUN9 316 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 FAM151AQ8WW52 585 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 CEP95Q96GE4 821 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 CSRNP1Q96S65 589 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 TMEM39BQ9GZU3 492 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 STX8Q9UNK0 236 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 TROAPQ12815 778 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 UVSSAQ2YD98 709 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 DGKHQ86XP1 1220 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 NUP62CLQ9H1M0 184 aa29.44■■■□□ 2.3
KLHL42-202ENST00000539176 COL2A1P02458 1487 aaPredicted RBP29.43■■■□□ 2.3
KLHL42-202ENST00000539176 C9orf131Q5VYM1 1079 aa29.43■■■□□ 2.3
KLHL42-202ENST00000539176 TRIM34Q9BYJ4 488 aa29.43■■■□□ 2.3
KLHL42-202ENST00000539176 KAT14Q9H8E8 782 aa29.43■■■□□ 2.3
KLHL42-202ENST00000539176 GPC2Q8N158 579 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 CCDC82Q8N4S0 544 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 BICD2Q8TD16 824 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 ANKS1AQ92625 1134 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 PDLIM2Q96JY6 352 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 MTMR7Q9Y216 660 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 KIF4BQ2VIQ3 1234 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms