RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 FEZ1Q99689 392 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 STXBP5LQ9Y2K9 1186 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
VAMP1-206ENST00000538970 RPTORQ8N122 1335 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 ALPK3Q96L96 1907 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 DOCK3Q8IZD9 2030 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 HMMRO75330 724 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 CYP2B6P20813 491 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 MAPK4P31152 587 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 ZYXQ15942 572 aaKnown RBP15.18■□□□□ 0.02
VAMP1-206ENST00000538970 ABCB5Q2M3G0 1257 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 Q3C1V9 767 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
VAMP1-206ENST00000538970 DNAJC2Q99543 621 aaKnown RBP15.18■□□□□ 0.02
VAMP1-206ENST00000538970 NUDT12Q9BQG2 462 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 PAGR1Q9BTK6 254 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 KIAA1683Q9H0B3 1180 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 PORCNQ9H237 461 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 HMX1Q9NP08 348 aaPredicted RBP15.18■□□□□ 0.02
VAMP1-206ENST00000538970 VCANP13611 3396 aa15.18■□□□□ 0.02
VAMP1-206ENST00000538970 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 GOLIM4O00461 696 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
VAMP1-206ENST00000538970 XRCC5P13010 732 aaKnown RBP15.17■□□□□ 0.02
VAMP1-206ENST00000538970 VCAM1P19320 739 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 USP14P54578 494 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 GABPAQ06546 454 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 PDE3AQ14432 1141 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 GPR142Q7Z601 462 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 ANKLE1Q8NAG6 615 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 ACER1Q8TDN7 264 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 USP6NLQ92738 828 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 PAWRQ96IZ0 340 aaKnown RBP15.17■□□□□ 0.02
VAMP1-206ENST00000538970 GDF15Q99988 308 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 CRNKL1Q9BZJ0 848 aaKnown RBP15.17■□□□□ 0.02
VAMP1-206ENST00000538970 MTMR10Q9NXD2 777 aa15.17■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 RAB11FIP3O75154 756 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 CNMDO75829 334 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
VAMP1-206ENST00000538970 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
VAMP1-206ENST00000538970 GUCY1A2P33402 732 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 EVX2Q03828 476 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 NECAB2Q7Z6G3 386 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 EDC3Q96F86 508 aaKnown RBP15.16■□□□□ 0.02
VAMP1-206ENST00000538970 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
VAMP1-206ENST00000538970 SPTBN5Q9NRC6 3674 aaKnown RBP15.15■□□□□ 0.02
VAMP1-206ENST00000538970 ZKSCAN1P17029 563 aaPredicted RBP15.15■□□□□ 0.02
VAMP1-206ENST00000538970 RGS2P41220 211 aa15.15■□□□□ 0.02
VAMP1-206ENST00000538970 MORN1Q5T089 497 aa15.15■□□□□ 0.02
VAMP1-206ENST00000538970 CATSPERGQ6ZRH7 1159 aa15.15■□□□□ 0.02
VAMP1-206ENST00000538970 PLEKHH3Q7Z736 793 aa15.15■□□□□ 0.02
VAMP1-206ENST00000538970 CCAR1Q8IX12 1150 aaKnown RBP15.15■□□□□ 0.02
VAMP1-206ENST00000538970 TRMT44Q8IYL2 757 aaKnown RBP15.15■□□□□ 0.02
VAMP1-206ENST00000538970 SDR42E1Q8WUS8 393 aa15.15■□□□□ 0.02
VAMP1-206ENST00000538970 APBA2Q99767 749 aa15.15■□□□□ 0.02
VAMP1-206ENST00000538970 DCP1AQ9NPI6 582 aaPredicted RBP15.15■□□□□ 0.02
VAMP1-206ENST00000538970 SEPT2Q15019 361 aa15.14■□□□□ 0.01
VAMP1-206ENST00000538970 GPR153Q6NV75 609 aa15.14■□□□□ 0.01
VAMP1-206ENST00000538970 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
VAMP1-206ENST00000538970 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.14■□□□□ 0.01
VAMP1-206ENST00000538970 CHMP4BQ9H444 224 aaKnown RBP15.14■□□□□ 0.01
VAMP1-206ENST00000538970 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
VAMP1-206ENST00000538970 OGDHLQ9ULD0 1010 aa15.14■□□□□ 0.01
VAMP1-206ENST00000538970 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
VAMP1-206ENST00000538970 EYSQ5T1H1 3165 aa15.14■□□□□ 0.01
VAMP1-206ENST00000538970 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
VAMP1-206ENST00000538970 CYP2D6P10635 497 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 ATP5JP18859 108 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 BMP8BP34820 402 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 ADD2P35612 726 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 CCNA1P78396 465 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 CACNB2Q08289 660 aaPredicted RBP15.13■□□□□ 0.01
VAMP1-206ENST00000538970 CCL14Q16627 93 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 C7orf61Q8IZ16 206 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 BCL11AQ9H165 835 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 BOLA2Q9H3K6 86 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 RPAP3Q9H6T3 665 aaPredicted RBP15.13■□□□□ 0.01
VAMP1-206ENST00000538970 ARMT1Q9H993 441 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
VAMP1-206ENST00000538970 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
VAMP1-206ENST00000538970 MPHOSPH10O00566 681 aaKnown RBP15.12■□□□□ 0.01
VAMP1-206ENST00000538970 MBD4O95243 580 aa15.12■□□□□ 0.01
VAMP1-206ENST00000538970 MAP2K5Q13163 448 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms