RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
CD9-208ENST00000538834 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 MCOLN1Q9GZU1 580 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 ANAPC4Q9UJX5 808 aa16.41■□□□□ 0.22
CD9-208ENST00000538834 RBBP6Q7Z6E9 1792 aaKnown RBP16.41■□□□□ 0.22
CD9-208ENST00000538834 IGKV6D-41A0A0C4DH26 115 aa16.4■□□□□ 0.22
CD9-208ENST00000538834 AKR1B1P15121 316 aa16.4■□□□□ 0.22
CD9-208ENST00000538834 MTMR2Q13614 643 aa16.4■□□□□ 0.22
CD9-208ENST00000538834 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
CD9-208ENST00000538834 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
CD9-208ENST00000538834 DDRGK1Q96HY6 314 aa16.4■□□□□ 0.22
CD9-208ENST00000538834 TACC3Q9Y6A5 838 aa16.4■□□□□ 0.22
CD9-208ENST00000538834 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 CYP2C8P10632 490 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
CD9-208ENST00000538834 CTGFP29279 349 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 IFFO2Q5TF58 517 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 GADL1Q6ZQY3 521 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
CD9-208ENST00000538834 RILPL2Q969X0 211 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 ERO1AQ96HE7 468 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
CD9-208ENST00000538834 CABP5Q9NP86 173 aa16.39■□□□□ 0.21
CD9-208ENST00000538834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
CD9-208ENST00000538834 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
CD9-208ENST00000538834 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
CD9-208ENST00000538834 OTOP1Q7RTM1 612 aa16.38■□□□□ 0.21
CD9-208ENST00000538834 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
CD9-208ENST00000538834 IL25Q9H293 177 aa16.38■□□□□ 0.21
CD9-208ENST00000538834 TMX2Q9Y320 296 aa16.38■□□□□ 0.21
CD9-208ENST00000538834 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
CD9-208ENST00000538834 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
CD9-208ENST00000538834 HIP1O00291 1037 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 FGAP02671 866 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 NOVP48745 357 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 USP14P54578 494 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 PPARAQ07869 468 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 CD99L2Q8TCZ2 262 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 ABHD8Q96I13 439 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
CD9-208ENST00000538834 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
CD9-208ENST00000538834 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 TDO2P48775 406 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 PABPC4Q13310 644 aaKnown RBP eCLIP16.36■□□□□ 0.21
CD9-208ENST00000538834 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 NAPBQ9H115 298 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 KANSL2Q9H9L4 492 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 CPA4Q9UI42 421 aa16.36■□□□□ 0.21
CD9-208ENST00000538834 GNRH1P01148 92 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 APPP05067 770 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
CD9-208ENST00000538834 FAM110CQ1W6H9 321 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 FBXO46Q6PJ61 603 aaPredicted RBP16.35■□□□□ 0.21
CD9-208ENST00000538834 CATSPERGQ6ZRH7 1159 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 MKL1Q969V6 931 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 P2RX7Q99572 595 aaKnown RBP16.35■□□□□ 0.21
CD9-208ENST00000538834 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 NBPF3Q9H094 633 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
CD9-208ENST00000538834 ORC4O43929 436 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 VCAM1P19320 739 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 CHMLP26374 656 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 CLEC10AQ8IUN9 316 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 NEDD1Q8NHV4 660 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 RBPJLQ9UBG7 517 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
CD9-208ENST00000538834 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.2
CD9-208ENST00000538834 OSBPP22059 807 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
CD9-208ENST00000538834 HERVK_113P62684 666 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 ICA1Q05084 483 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.2
CD9-208ENST00000538834 TRIM47Q96LD4 638 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 DSCC1Q9BVC3 393 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 SYNPO2Q9UMS6 1093 aa16.33■□□□□ 0.2
CD9-208ENST00000538834 USP17L15C9J2P7 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L13C9JLJ4 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L11C9JVI0 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L18D6R9N7 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L22D6RA61 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L17D6RBQ6 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L19D6RCP7 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L20D6RJB6 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CD9-208ENST00000538834 BRCA2P51587 3418 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 PDE4BQ07343 736 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 USP17L24Q0WX57 530 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 LPAR1Q92633 364 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 RAD50Q92878 1312 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms