RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 F8W031 263 aaPredicted RBP17.09■□□□□ 0.33
ATL3-203ENST00000538786 CHRNA5P30532 468 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
ATL3-203ENST00000538786 HHIPL2Q6UWX4 724 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 FMR1NBQ8N0W7 255 aaPredicted RBP17.09■□□□□ 0.33
ATL3-203ENST00000538786 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
ATL3-203ENST00000538786 PNMA1Q8ND90 353 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
ATL3-203ENST00000538786 CNTNAP5Q8WYK1 1306 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 CMA1P23946 247 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
ATL3-203ENST00000538786 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.33
ATL3-203ENST00000538786 C7orf43Q8WVR3 580 aa17.08■□□□□ 0.33
ATL3-203ENST00000538786 MXD3Q9BW11 206 aa17.08■□□□□ 0.33
ATL3-203ENST00000538786 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.33
ATL3-203ENST00000538786 NDUFA8P51970 172 aa17.08■□□□□ 0.32
ATL3-203ENST00000538786 FKBP1AP62942 108 aaKnown RBP17.08■□□□□ 0.32
ATL3-203ENST00000538786 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
ATL3-203ENST00000538786 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
ATL3-203ENST00000538786 TEKT1Q969V4 418 aa17.08■□□□□ 0.32
ATL3-203ENST00000538786 SHISA4Q96DD7 197 aa17.08■□□□□ 0.32
ATL3-203ENST00000538786 VPS54Q9P1Q0 977 aa17.08■□□□□ 0.32
ATL3-203ENST00000538786 SNED1Q8TER0 1413 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 CDK5RAP2Q96SN8 1893 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 A0A1B0GVL5 298 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
ATL3-203ENST00000538786 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
ATL3-203ENST00000538786 GNAQP50148 359 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 TOB1P50616 345 aaPredicted RBP17.07■□□□□ 0.32
ATL3-203ENST00000538786 NR5A1Q13285 461 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 GRM4Q14833 912 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 OXER1Q8TDS5 423 aa17.07■□□□□ 0.32
ATL3-203ENST00000538786 KRT2P35908 639 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 BAG6P46379 1132 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 SCNN1DP51172 638 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
ATL3-203ENST00000538786 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 USP40Q9NVE5 1235 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 CAVIN2O95810 425 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 SCG2P13521 617 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 PICALMQ13492 652 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
ATL3-203ENST00000538786 TMEM47Q9BQJ4 181 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 BRMS1Q9HCU9 246 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
ATL3-203ENST00000538786 STX8Q9UNK0 236 aa17.06■□□□□ 0.32
ATL3-203ENST00000538786 ECE2O60344 883 aa17.05■□□□□ 0.32
ATL3-203ENST00000538786 CUTAO60888 179 aa17.05■□□□□ 0.32
ATL3-203ENST00000538786 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
ATL3-203ENST00000538786 HS1BP3Q53T59 392 aa17.05■□□□□ 0.32
ATL3-203ENST00000538786 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
ATL3-203ENST00000538786 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
ATL3-203ENST00000538786 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 PFKFB1P16118 471 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 GABPAQ06546 454 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 DACT2Q5SW24 774 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 CABP5Q9NP86 173 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
ATL3-203ENST00000538786 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 MAD2L2Q9UI95 211 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 FOCADQ5VW36 1801 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 CRKP46108 304 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 NOVP48745 357 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
ATL3-203ENST00000538786 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
ATL3-203ENST00000538786 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 SDF4Q9BRK5 362 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 CEP131Q9UPN4 1083 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 HPSEQ9Y251 543 aa17.04■□□□□ 0.32
ATL3-203ENST00000538786 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 PLIN4Q96Q06 1357 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 ZNF202O95125 648 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 NPY5RQ15761 445 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 SHC4Q6S5L8 630 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
ATL3-203ENST00000538786 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
ATL3-203ENST00000538786 PALM3A6NDB9 673 aaPredicted RBP17.02■□□□□ 0.32
ATL3-203ENST00000538786 TOP1P11387 765 aaKnown RBP17.02■□□□□ 0.32
ATL3-203ENST00000538786 STX1AQ16623 288 aa17.02■□□□□ 0.32
ATL3-203ENST00000538786 GRIPAP1Q4V328 841 aa17.02■□□□□ 0.32
ATL3-203ENST00000538786 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
ATL3-203ENST00000538786 TIGD1Q96MW7 591 aa17.02■□□□□ 0.32
ATL3-203ENST00000538786 PDGFDQ9GZP0 370 aaPredicted RBP17.02■□□□□ 0.32
ATL3-203ENST00000538786 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.32
ATL3-203ENST00000538786 SWAP70Q9UH65 585 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms