RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SDR42E1Q8WUS8 393 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 NSUN4Q96CB9 384 aaKnown RBP10.66□□□□□ -0.7
DDB1-211ENST00000538280 SDF4Q9BRK5 362 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 NAT10Q9H0A0 1025 aaKnown RBP10.66□□□□□ -0.7
DDB1-211ENST00000538280 DDX60LQ5H9U9 1706 aaKnown RBP10.66□□□□□ -0.7
DDB1-211ENST00000538280 MYH2Q9UKX2 1941 aa10.66□□□□□ -0.7
DDB1-211ENST00000538280 PASKQ96RG2 1323 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 LTBP3Q9NS15 1303 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 WTIPA6NIX2 430 aaPredicted RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 IKBKBO14920 756 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 NEMFO60524 1076 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 SLC3A2P08195 630 aaKnown RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 TOB1P50616 345 aaPredicted RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 DYNLL1P63167 89 aaKnown RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 NCAPHQ15003 741 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 DPCR1Q3MIW9 517 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 SBK1Q52WX2 424 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 RRP12Q5JTH9 1297 aaKnown RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 CTR9Q6PD62 1173 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 DIS3L2Q8IYB7 885 aaKnown RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 CACTINQ8WUQ7 758 aaKnown RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 SHISA4Q96DD7 197 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 TAOK3Q9H2K8 898 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 KCND1Q9NSA2 647 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 CLIP2Q9UDT6 1046 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 ABCF2Q9UG63 623 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 NRBP1Q9UHY1 535 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 FBXO2Q9UK22 296 aaPredicted RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 IQSEC3Q9UPP2 1182 aaPredicted RBP10.65□□□□□ -0.7
DDB1-211ENST00000538280 SNED1Q8TER0 1413 aa10.65□□□□□ -0.7
DDB1-211ENST00000538280 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 A0A087WWV3 80 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 BECN2A8MW95 431 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 PRPF3O43395 683 aaKnown RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 RRP9O43818 475 aaKnown RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 DDAH1O94760 285 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 SRGNP10124 158 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 PTPREP23469 700 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 KLRK1P26718 216 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 SYKP43405 635 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 SAFBQ15424 915 aaKnown RBP eCLIP10.64□□□□□ -0.71
DDB1-211ENST00000538280 PKN1Q16512 942 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 RILPL1Q5EBL4 403 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 C15orf52Q6ZUT6 534 aaKnown RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 STK11IPQ8N1F8 1099 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 ENAHQ8N8S7 591 aaPredicted RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 SETDB2Q96T68 719 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 NOL10Q9BSC4 688 aaKnown RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 UBAC1Q9BSL1 405 aa10.64□□□□□ -0.71
DDB1-211ENST00000538280 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 RBM28Q9NW13 759 aaKnown RBP10.64□□□□□ -0.71
DDB1-211ENST00000538280 SMTNL1A8MU46 457 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 MINDY4BA8MYZ0 360 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 BTBD18B2RXH4 712 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 SMIM22K7EJ46 135 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 CALM1P0DP23 149 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 CALM2P0DP24 149 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 CALM3P0DP25 149 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 HIBADHP31937 336 aaKnown RBP10.63□□□□□ -0.71
DDB1-211ENST00000538280 PDE6BP35913 854 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
DDB1-211ENST00000538280 MECOMQ03112 1051 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 LRMPQ12912 555 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
DDB1-211ENST00000538280 KRBA2Q6ZNG9 492 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
DDB1-211ENST00000538280 NBPF5PQ86XG9 351 aaPredicted RBP10.63□□□□□ -0.71
DDB1-211ENST00000538280 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
DDB1-211ENST00000538280 CNBD1Q8NA66 436 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 PHF20Q9BVI0 1012 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 ATP8A2Q9NTI2 1148 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 IMPACTQ9P2X3 320 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 KCNJ14Q9UNX9 436 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 ROBO3Q96MS0 1386 aa10.63□□□□□ -0.71
DDB1-211ENST00000538280 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 CDK5RAP2Q96SN8 1893 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 MYO1BO43795 1136 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 VEGFBP49765 207 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 CCZ1BP86790 482 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 CCZ1P86791 482 aaPredicted RBP10.62□□□□□ -0.71
DDB1-211ENST00000538280 TROAPQ12815 778 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 LRRC8AQ8IWT6 810 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 DRC7Q8IY82 874 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 C7orf43Q8WVR3 580 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 TNFRSF25Q93038 417 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 CLIC6Q96NY7 704 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 CRNKL1Q9BZJ0 848 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms