RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 LACTBP83111 547 aaPredicted RBP10.09□□□□□ -0.79
SPARC-208ENST00000538026 P2RX7Q99572 595 aaKnown RBP10.09□□□□□ -0.79
SPARC-208ENST00000538026 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
SPARC-208ENST00000538026 ASCC2Q9H1I8 757 aaPredicted RBP10.09□□□□□ -0.79
SPARC-208ENST00000538026 IL25Q9H293 177 aa10.09□□□□□ -0.79
SPARC-208ENST00000538026 PTPN22Q9Y2R2 807 aa10.09□□□□□ -0.79
SPARC-208ENST00000538026 LAMA2P24043 3122 aaKnown RBP10.09□□□□□ -0.79
SPARC-208ENST00000538026 PLXNB2O15031 1838 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 USP17L10C9JJH3 530 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 RASA1P20936 1047 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 HOXA7P31268 230 aaPredicted RBP10.08□□□□□ -0.8
SPARC-208ENST00000538026 NMIQ13287 307 aaPredicted RBP10.08□□□□□ -0.8
SPARC-208ENST00000538026 RAB3GAP1Q15042 981 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 FBXO46Q6PJ61 603 aaPredicted RBP10.08□□□□□ -0.8
SPARC-208ENST00000538026 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 ERO1AQ96HE7 468 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 C12orf42Q96LP6 360 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 KIAA1683Q9H0B3 1180 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 EFCC1Q9HA90 598 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 TXNRD2Q9NNW7 524 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 SWAP70Q9UH65 585 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 ROBO3Q96MS0 1386 aa10.08□□□□□ -0.8
SPARC-208ENST00000538026 PARP14Q460N5 1801 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 IGKV6D-41A0A0C4DH26 115 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 CCDC85CA6NKD9 419 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 MINDY4BA8MYZ0 360 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 CNMDO75829 334 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 SDSP20132 328 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 ZYXQ15942 572 aaKnown RBP10.07□□□□□ -0.8
SPARC-208ENST00000538026 PKN2Q16513 984 aaKnown RBP10.07□□□□□ -0.8
SPARC-208ENST00000538026 Q3C1V9 767 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 PARK7Q99497 189 aaKnown RBP10.07□□□□□ -0.8
SPARC-208ENST00000538026 AS3MTQ9HBK9 375 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 RBPJLQ9UBG7 517 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 PTCH2Q9Y6C5 1203 aa10.07□□□□□ -0.8
SPARC-208ENST00000538026 CEP290O15078 2479 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 MYH4Q9Y623 1939 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 MPHOSPH10O00566 681 aaKnown RBP10.06□□□□□ -0.8
SPARC-208ENST00000538026 PRDM1O75626 825 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 FGAP02671 866 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 GNAT2P19087 354 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 OSBPP22059 807 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 PSMC4P43686 418 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 ALX1Q15699 326 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 USP17L2Q6R6M4 530 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 TMEM179Q6ZVK1 233 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 ANKRD13CQ8N6S4 541 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 RILPL2Q969X0 211 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 ARPP21Q9UBL0 812 aaPredicted RBP10.06□□□□□ -0.8
SPARC-208ENST00000538026 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
SPARC-208ENST00000538026 GABRQQ9UN88 632 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.06□□□□□ -0.8
SPARC-208ENST00000538026 SMCHD1A6NHR9 2005 aa10.06□□□□□ -0.8
SPARC-208ENST00000538026 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 APPP05067 770 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 FGRP09769 529 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 HSPD1P10809 573 aaKnown RBP10.05□□□□□ -0.8
SPARC-208ENST00000538026 EEF2P13639 858 aaKnown RBP10.05□□□□□ -0.8
SPARC-208ENST00000538026 VCAM1P19320 739 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 RGS19P49795 217 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 HERVK_113P62684 666 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 CTDSPL2Q05D32 466 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 TTC22Q5TAA0 569 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 CATSPERGQ6ZRH7 1159 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 ARMC5Q96C12 935 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 CCDC17Q96LX7 622 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 CABP5Q9NP86 173 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 MORF4L1Q9UBU8 362 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 SRRDQ9UH36 339 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 GJD2Q9UKL4 321 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 TAOK2Q9UL54 1235 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 TMX2Q9Y320 296 aa10.05□□□□□ -0.8
SPARC-208ENST00000538026 TDO2P48775 406 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 PRKCZQ05513 592 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 PPARAQ07869 468 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 LRRFIP1Q32MZ4 808 aaKnown RBP10.04□□□□□ -0.8
SPARC-208ENST00000538026 FAM47AQ5JRC9 791 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 RPAP3Q9H6T3 665 aaPredicted RBP10.04□□□□□ -0.8
SPARC-208ENST00000538026 TMOD4Q9NZQ9 345 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 BTBD7Q9P203 1132 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 ANAPC4Q9UJX5 808 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 COL11A1P12107 1806 aaPredicted RBP10.04□□□□□ -0.8
SPARC-208ENST00000538026 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
SPARC-208ENST00000538026 ZNFX1Q9P2E3 1918 aaKnown RBP10.03□□□□□ -0.8
SPARC-208ENST00000538026 SZT2Q5T011 3432 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
SPARC-208ENST00000538026 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms